Robert Stojnic
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/PWMEnrich |
| Branch: RELEASE_3_9 |
| Last Commit: ab13907 |
| Last Changed Date: 2019-05-02 11:53:36 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:26:35 -0400 (Wed, 16 Oct 2019).
| Package 1280/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| PWMEnrich 4.20.0 Robert Stojnic
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: PWMEnrich |
| Version: 4.20.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PWMEnrich_4.20.0.tar.gz && rm -rf PWMEnrich.buildbin-libdir && mkdir PWMEnrich.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PWMEnrich.buildbin-libdir PWMEnrich_4.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PWMEnrich_4.20.0.zip && rm PWMEnrich_4.20.0.tar.gz PWMEnrich_4.20.0.zip |
| StartedAt: 2019-10-15 19:37:14 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:38:42 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 87.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PWMEnrich_4.20.0.tar.gz && rm -rf PWMEnrich.buildbin-libdir && mkdir PWMEnrich.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PWMEnrich.buildbin-libdir PWMEnrich_4.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PWMEnrich_4.20.0.zip && rm PWMEnrich_4.20.0.tar.gz PWMEnrich_4.20.0.zip
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install for i386
* installing *source* package 'PWMEnrich' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'PWMEnrich'
finding HTML links ... done
MotifEnrichmentReport html
MotifEnrichmentResults html
PFMtoPWM html
PWM html
PWMCutoffBackground html
PWMEmpiricalBackground html
PWMGEVBackground html
PWMLognBackground html
PWMUnscaled html
as.data.frame-commaMotifEnrichmentReport-method
html
getBackgroundFrequencies html
groupReport-commaMotifEnrichmentResults-method
html
makeBackground html
makePWMCutoffBackground html
makePWMEmpiricalBackground html
makePWMGEVBackground html
makePWMLognBackground html
makePWMPvalCutoffBackground html
makePWMPvalCutoffBackgroundFromSeq html
makePriors html
motifDiffEnrichment html
motifEcdf html
motifEnrichment html
motifIC html
motifRankingForGroup-commaMotifEnrichmentResults-method
html
motifRankingForSequence-commaMotifEnrichmentResults-method
html
motifScores html
motifSimilarity html
operators-MotifEnrichmentReport html
operators-MotifEnrichmentResults html
operators-PWM html
operators-PWMCutoffBackground html
operators-PWMEmpiricalBackground html
operators-PWMGEVBackground html
operators-PWMLognBackground html
plot html
plotMotifScores html
plotMultipleMotifs html
plotTopMotifsGroup-commaMotifEnrichmentResults-method
html
plotTopMotifsSequence-commaMotifEnrichmentResults-method
html
readMotifs html
registerCoresPWMEnrich html
reverseComplement html
scanWithPWM html
seqLogoGrid html
sequenceReport-commaMotifEnrichmentResults-method
html
subsetting-PWMCutoffBackground html
subsetting-PWMEmpiricalBackground html
subsetting-PWMGEVBackground html
subsetting-PWMLognBackground html
toPWM html
useBigMemoryPWMEnrich html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'PWMEnrich' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PWMEnrich' as PWMEnrich_4.20.0.zip
* DONE (PWMEnrich)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'PWMEnrich' successfully unpacked and MD5 sums checked