Back to Multiple platform build/check report for BioC 3.9
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

CHECK report for InterMineR on tokay2

This page was generated on 2019-10-15 13:17:08 -0400 (Tue, 15 Oct 2019).

Package 823/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
InterMineR 1.6.1
InterMine Team
Snapshot Date: 2019-10-14 17:00:44 -0400 (Mon, 14 Oct 2019)
URL: https://git.bioconductor.org/packages/InterMineR
Branch: RELEASE_3_9
Last Commit: d2f1a3b
Last Changed Date: 2019-07-08 07:35:51 -0400 (Mon, 08 Jul 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK [ WARNINGS ] OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: InterMineR
Version: 1.6.1
Command: C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:InterMineR.install-out.txt --library=C:\Users\biocbuild\bbs-3.9-bioc\R\library --no-vignettes --timings InterMineR_1.6.1.tar.gz
StartedAt: 2019-10-15 04:38:38 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 04:46:27 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 468.5 seconds
RetCode: 0
Status:  WARNINGS  
CheckDir: InterMineR.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:InterMineR.install-out.txt --library=C:\Users\biocbuild\bbs-3.9-bioc\R\library --no-vignettes --timings InterMineR_1.6.1.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'C:/Users/biocbuild/bbs-3.9-bioc/meat/InterMineR.Rcheck'
* using R version 3.6.1 (2019-07-05)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'InterMineR/DESCRIPTION' ... OK
* this is package 'InterMineR' version '1.6.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  .travis.yml
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
* checking for portable file names ... OK
* checking whether package 'InterMineR' can be installed ... WARNING
Found the following significant warnings:
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:5: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:8: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:26: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:29: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:32: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:35: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:38: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:41: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:44: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:47: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:56: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:59: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:66: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGeneAnswers.Rd:8: file link 'GeneAnswers' in package 'GeneAnswers' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:5: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:8: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:43: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:46: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:52: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:54: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:58: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:61: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:69: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
See 'C:/Users/biocbuild/bbs-3.9-bioc/meat/InterMineR.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
File
  LICENSE
is not mentioned in the DESCRIPTION file.
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
convertToGeneAnswers: no visible binding for global variable
  'geneExpProfile'
convertToRangedSummarizedExperiment: no visible global function
  definition for 'reshape'
doEnrichment: no visible global function definition for 'URLencode'
listDatasets: no visible binding for global variable 'child_name'
runQuery,ANY-InterMineR: no visible global function definition for
  'URLencode'
runQuery,ANY-list: no visible global function definition for
  'URLencode'
Undefined global functions or variables:
  URLencode child_name geneExpProfile reshape
Consider adding
  importFrom("stats", "reshape")
  importFrom("utils", "URLencode")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
                                     user system elapsed
convertToGeneAnswers                17.11   0.18   27.56
simplifyResult                       9.22   0.20   11.47
doEnrichment                         6.36   0.25   38.12
convertToRangedSummarizedExperiment  3.81   0.00    7.63
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
                                     user system elapsed
convertToGeneAnswers                19.26   0.17   30.31
simplifyResult                       7.65   0.05    9.67
doEnrichment                         6.48   0.18   38.05
convertToRangedSummarizedExperiment  4.36   0.02    8.44
runQuery                             3.43   0.02    5.29
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  'C:/Users/biocbuild/bbs-3.9-bioc/meat/InterMineR.Rcheck/00check.log'
for details.

Installation output

InterMineR.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/InterMineR_1.6.1.tar.gz && rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InterMineR.buildbin-libdir InterMineR_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL InterMineR_1.6.1.zip && rm InterMineR_1.6.1.tar.gz InterMineR_1.6.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 4512k  100 4512k    0     0  46.1M      0 --:--:-- --:--:-- --:--:-- 49.5M

install for i386

* installing *source* package 'InterMineR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'InterMineR'
    finding HTML links ... done
    InterMineR-class                        html  
    InterMineR-methods                      html  
    InterMineR-package                      html  
    PL_DiabetesGenes                        html  
    PL_FlyTF_site_specific_TFs              html  
    convertToGRanges                        html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:5: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:8: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:26: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:29: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:32: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:35: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:38: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:41: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:44: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:47: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:56: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:59: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGRanges.Rd:66: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
    convertToGeneAnswers                    html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToGeneAnswers.Rd:8: file link 'GeneAnswers' in package 'GeneAnswers' does not exist and so has been treated as a topic
    convertToRangedSummarizedExperiment     html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:5: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:8: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:43: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:46: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:52: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:54: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:58: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:61: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpKk0PQs/R.INSTALL1ef83e802249/InterMineR/man/convertToRangedSummarizedExperiment.Rd:69: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    doEnrichment                            html  
    getDatasets                             html  
    getGeneIds                              html  
    getModel                                html  
    getRelease                              html  
    getTemplateQuery                        html  
    getTemplates                            html  
    getVersion                              html  
    getWidgets                              html  
    initInterMine                           html  
    listDatasets                            html  
    listMines                               html  
    newQuery                                html  
    runQuery                                html  
    setConstraints                          html  
    setQuery                                html  
    simplifyResult                          html  
    summary                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'InterMineR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'InterMineR' as InterMineR_1.6.1.zip
* DONE (InterMineR)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'InterMineR' successfully unpacked and MD5 sums checked

Tests output

Example timings

InterMineR.Rcheck/examples_i386/InterMineR-Ex.timings

nameusersystemelapsed
InterMineR-methods0.170.030.80
PL_DiabetesGenes000
PL_FlyTF_site_specific_TFs000
convertToGRanges0.650.041.35
convertToGeneAnswers17.11 0.1827.56
convertToRangedSummarizedExperiment3.810.007.63
doEnrichment 6.36 0.2538.12
getDatasets0.140.000.83
getGeneIds0.490.032.85
getModel000
getRelease0.030.000.30
getTemplateQuery0.010.000.30
getTemplates0.050.000.51
getVersion0.030.000.30
getWidgets0.050.000.61
initInterMine0.010.000.19
listDatasets000
listMines0.020.000.18
newQuery000
runQuery3.080.024.83
setConstraints0.050.000.53
setQuery0.060.000.50
simplifyResult 9.22 0.2011.47
summary0.050.020.31

InterMineR.Rcheck/examples_x64/InterMineR-Ex.timings

nameusersystemelapsed
InterMineR-methods0.110.000.69
PL_DiabetesGenes0.000.020.01
PL_FlyTF_site_specific_TFs000
convertToGRanges0.780.061.44
convertToGeneAnswers19.26 0.1730.31
convertToRangedSummarizedExperiment4.360.028.44
doEnrichment 6.48 0.1838.05
getDatasets0.160.000.81
getGeneIds0.580.002.99
getModel000
getRelease0.040.000.31
getTemplateQuery0.030.000.29
getTemplates0.040.000.52
getVersion0.010.000.30
getWidgets0.060.000.62
initInterMine0.020.000.25
listDatasets000
listMines0.040.000.22
newQuery000
runQuery3.430.025.29
setConstraints0.050.000.50
setQuery0.050.000.52
simplifyResult7.650.059.67
summary0.020.010.28