Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

BUILD report for seq2pathway on malbec2

This page was generated on 2019-10-16 12:06:05 -0400 (Wed, 16 Oct 2019).

Package 1489/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
seq2pathway 1.16.0
Xinan Yang with contribution from Zhezhen Wang
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/seq2pathway
Branch: RELEASE_3_9
Last Commit: acd43f5
Last Changed Date: 2019-05-02 11:53:52 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK [ OK ] OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: seq2pathway
Version: 1.16.0
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data seq2pathway
StartedAt: 2019-10-15 21:16:10 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 21:17:07 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 56.8 seconds
RetCode: 0
Status:  OK 
PackageFile: seq2pathway_1.16.0.tar.gz
PackageFileSize: 6.058 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data seq2pathway
###
##############################################################################
##############################################################################


* checking for file ‘seq2pathway/DESCRIPTION’ ... OK
* preparing ‘seq2pathway’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
Warning: ‘inst/doc’ files
    ‘seq2pathwaypackage.Rnw’, ‘seq2pathwaypackage.pdf’,  ‘seq2pathwaypackage.R’
  ignored as vignettes have been rebuilt.
  Run R CMD build with --no-build-vignettes to prevent rebuilding.
* excluding invalid files
Subdirectory 'R' contains invalid file names:
  ‘seq2pathway’ ‘seq2pathway.rdb’ ‘seq2pathway.rdx’
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: Removing directory ‘seq2pathway/Meta’ which should only occur
  in an installed package
WARNING: Removing directory ‘seq2pathway/help’ which should only occur
  in an installed package
WARNING: Removing directory ‘seq2pathway/html’ which should only occur
  in an installed package
* looking to see if a ‘data/datalist’ file should be added
* building ‘seq2pathway_1.16.0.tar.gz’