Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

BUILD BIN report for rama on tokay2

This page was generated on 2019-10-16 12:19:12 -0400 (Wed, 16 Oct 2019).

Package 1307/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rama 1.58.0
Raphael Gottardo
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/rama
Branch: RELEASE_3_9
Last Commit: 3519fd0
Last Changed Date: 2019-05-02 11:53:02 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: rama
Version: 1.58.0
Command: rm -rf rama.buildbin-libdir && mkdir rama.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rama.buildbin-libdir rama_1.58.0.tar.gz
StartedAt: 2019-10-16 10:00:11 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 10:00:47 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 35.8 seconds
RetCode: 0
Status:  OK  
PackageFile: rama_1.58.0.zip
PackageFileSize: 604.1 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf rama.buildbin-libdir && mkdir rama.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rama.buildbin-libdir rama_1.58.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'rama' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c estimation_slice.c -o estimation_slice.o
estimation_slice.c: In function 'mcmc_shift':
estimation_slice.c:122:10: warning: unused variable 'SSeps_sd_new' [-Wunused-variable]
   double SSeps_sd_new=0.;
          ^
estimation_slice.c:121:10: warning: unused variable 'SSeps_sd' [-Wunused-variable]
   double SSeps_sd=0.;
          ^
estimation_slice.c:117:10: warning: unused variable 'pi' [-Wunused-variable]
   double pi=3.14;
          ^
estimation_slice.c:116:24: warning: unused variable 'SS12' [-Wunused-variable]
   double SSR1=0,SSR2=0,SS12=0;
                        ^
estimation_slice.c:116:17: warning: unused variable 'SSR2' [-Wunused-variable]
   double SSR1=0,SSR2=0,SS12=0;
                 ^
estimation_slice.c:116:10: warning: unused variable 'SSR1' [-Wunused-variable]
   double SSR1=0,SSR2=0,SS12=0;
          ^
estimation_slice.c:115:25: warning: unused variable 'dens_epsilon_new' [-Wunused-variable]
   double dens_epsilon=0,dens_epsilon_new=0;
                         ^
estimation_slice.c:115:10: warning: unused variable 'dens_epsilon' [-Wunused-variable]
   double dens_epsilon=0,dens_epsilon_new=0;
          ^
estimation_slice.c:114:22: warning: unused variable 'l_epsilon_new' [-Wunused-variable]
   double l_epsilon=0,l_epsilon_new=0;
                      ^
estimation_slice.c:114:10: warning: unused variable 'l_epsilon' [-Wunused-variable]
   double l_epsilon=0,l_epsilon_new=0;
          ^
estimation_slice.c:113:27: warning: unused variable 'lambda_eps2_new' [-Wunused-variable]
   double lambda_eps1_new, lambda_eps2_new;
                           ^
estimation_slice.c:113:10: warning: unused variable 'lambda_eps1_new' [-Wunused-variable]
   double lambda_eps1_new, lambda_eps2_new;
          ^
estimation_slice.c: In function 'slice_sampling_lambda_eps':
estimation_slice.c:484:10: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   while(J>0 & z0 & z0 & (z0 & (zlog_f_L & mLlog_f_R & mR>R)
        ^
util.c:613:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, a1;
             ^
util.c: In function 'slice_sampling_b':
util.c:703:17: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
   while(K>0 & (z0 & (zlog_f_L &  mLlog_f_R &  mR>R)
        ^
util.c:686:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, b1;
             ^
util.c: In function 'slice_sampling_b2':
util.c:767:10: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   while(J>0 & z0 & z0 & z0 & z0 & (z0 & (zlog_f_L &  mLlog_f_R &  mR>R)
        ^
util.c:860:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, rho_new;
             ^
util.c: In function 'slice_sampling_rho2':
util.c:935:10: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   while(J>0 & z0 & z0 & (z0 & (zlog_f_L  &  mLlog_f_R &  mR>R)
        ^
util.c:1000:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, shift_new;
             ^
util.c: In function 'slice_sampling_shift2':
util.c:1100:10: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   while(J>0 & z0 & z0 & z0 & z0 & z0 & z0 & (z0 & (zlog_f_L & mLlog_f_R & mR>R)
        ^
util.c:613:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, a1;
             ^
util.c: In function 'slice_sampling_b':
util.c:703:17: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
   while(K>0 & (z0 & (zlog_f_L &  mLlog_f_R &  mR>R)
        ^
util.c:686:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, b1;
             ^
util.c: In function 'slice_sampling_b2':
util.c:767:10: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   while(J>0 & z0 & z0 & z0 & z0 & (z0 & (zlog_f_L &  mLlog_f_R &  mR>R)
        ^
util.c:860:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, rho_new;
             ^
util.c: In function 'slice_sampling_rho2':
util.c:935:10: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   while(J>0 & z0 & z0 & (z0 & (zlog_f_L  &  mLlog_f_R &  mR>R)
        ^
util.c:1000:13: warning: unused variable 'v' [-Wunused-variable]
   double u, v, L, R, z, shift_new;
             ^
util.c: In function 'slice_sampling_shift2':
util.c:1100:10: warning: suggest parentheses around comparison in operand of '&' [-Wparentheses]
   while(J>0 & z0 & z0 & z0 & z