Chris Berthiaume
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/manta |
| Branch: RELEASE_3_9 |
| Last Commit: 282c99b |
| Last Changed Date: 2019-05-02 11:53:34 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:26:06 -0400 (Wed, 16 Oct 2019).
| Package 911/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| manta 1.30.0 Chris Berthiaume
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: manta |
| Version: 1.30.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/manta_1.30.0.tar.gz && rm -rf manta.buildbin-libdir && mkdir manta.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=manta.buildbin-libdir manta_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL manta_1.30.0.zip && rm manta_1.30.0.tar.gz manta_1.30.0.zip |
| StartedAt: 2019-10-15 19:12:41 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:13:38 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 56.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/manta_1.30.0.tar.gz && rm -rf manta.buildbin-libdir && mkdir manta.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=manta.buildbin-libdir manta_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL manta_1.30.0.zip && rm manta_1.30.0.tar.gz manta_1.30.0.zip
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install for i386
* installing *source* package 'manta' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'manta'
finding HTML links ... done
cmdArgsToVariables html
collapseRepliCounts html
compbiasPlot html
compbiasTest html
generateWeights html
in2manta html
makeSampleDF html
manta-class html
manta html
meta2counts html
metataxa2subcounts html
nf2nr html
normfact2absTMM html
nr html
outliers html
plot.manta html
pplacer2manta html
readSeastar html
seastar2counts html
summary.manta html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'manta' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'manta' as manta_1.30.0.zip
* DONE (manta)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'manta' successfully unpacked and MD5 sums checked