Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-10-16 12:41:18 -0400 (Wed, 16 Oct 2019).
Package 799/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
igvR 1.4.0 Paul Shannon
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
Package: igvR |
Version: 1.4.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/igvR_1.4.0.tar.gz && rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL igvR_1.4.0.zip && rm igvR_1.4.0.tar.gz igvR_1.4.0.zip |
StartedAt: 2019-10-15 20:38:28 -0400 (Tue, 15 Oct 2019) |
EndedAt: 2019-10-15 20:40:06 -0400 (Tue, 15 Oct 2019) |
EllapsedTime: 98.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/igvR_1.4.0.tar.gz && rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL igvR_1.4.0.zip && rm igvR_1.4.0.tar.gz igvR_1.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 3639k 100 3639k 0 0 39.4M 0 --:--:-- --:--:-- --:--:-- 42.3M install for i386 * installing *source* package 'igvR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'igvR' finding HTML links ... done DataFrameAnnotationTrack-class html DataFrameQuantitativeTrack-class html GRangesAnnotationTrack-class html GRangesQuantitativeTrack-class html GenomicAlignmentsTrack-class html QuantitativeTrack-class html Track-class html UCSCBedAnnotationTrack-class html UCSCBedGraphQuantitativeTrack-class html VariantTrack-class html displayTrack html getGenomicRegion html getSupportedGenomes html getTrackNames html igvAnnotationTrack-class html igvR-class html ping html removeTracksByName html setGenome html showGenomicRegion html trackInfo html trackSize-DataFrameAnnotationTrack-method html trackSize-DataFrameQuantitativeTrack-method html trackSize-GRangesAnnotationTrack-method html trackSize-GRangesQuantitativeTrack-method html trackSize-GenomicAlignmentTrack-method html trackSize-UCSCBedAnnotationTrack-method html trackSize-UCSCBedGraphQuantitativeTrack-method html trackSize-VariantTrack-method html trackSize html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'igvR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'igvR' as igvR_1.4.0.zip * DONE (igvR) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'igvR' successfully unpacked and MD5 sums checked