Paul Shannon
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/igvR |
| Branch: RELEASE_3_9 |
| Last Commit: 862aad9 |
| Last Changed Date: 2019-05-02 11:54:11 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:41:18 -0400 (Wed, 16 Oct 2019).
| Package 799/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| igvR 1.4.0 Paul Shannon
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: igvR |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/igvR_1.4.0.tar.gz && rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL igvR_1.4.0.zip && rm igvR_1.4.0.tar.gz igvR_1.4.0.zip |
| StartedAt: 2019-10-15 20:38:28 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:40:06 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 98.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/igvR_1.4.0.tar.gz && rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL igvR_1.4.0.zip && rm igvR_1.4.0.tar.gz igvR_1.4.0.zip
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install for i386
* installing *source* package 'igvR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'igvR'
finding HTML links ... done
DataFrameAnnotationTrack-class html
DataFrameQuantitativeTrack-class html
GRangesAnnotationTrack-class html
GRangesQuantitativeTrack-class html
GenomicAlignmentsTrack-class html
QuantitativeTrack-class html
Track-class html
UCSCBedAnnotationTrack-class html
UCSCBedGraphQuantitativeTrack-class html
VariantTrack-class html
displayTrack html
getGenomicRegion html
getSupportedGenomes html
getTrackNames html
igvAnnotationTrack-class html
igvR-class html
ping html
removeTracksByName html
setGenome html
showGenomicRegion html
trackInfo html
trackSize-DataFrameAnnotationTrack-method
html
trackSize-DataFrameQuantitativeTrack-method
html
trackSize-GRangesAnnotationTrack-method
html
trackSize-GRangesQuantitativeTrack-method
html
trackSize-GenomicAlignmentTrack-method
html
trackSize-UCSCBedAnnotationTrack-method
html
trackSize-UCSCBedGraphQuantitativeTrack-method
html
trackSize-VariantTrack-method html
trackSize html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'igvR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'igvR' as igvR_1.4.0.zip
* DONE (igvR)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'igvR' successfully unpacked and MD5 sums checked