Elsa Bernard
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/flipflop |
| Branch: RELEASE_3_9 |
| Last Commit: e01b4e1 |
| Last Changed Date: 2019-05-02 11:53:46 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:03:36 -0400 (Wed, 16 Oct 2019).
| Package 554/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| flipflop 1.22.0 Elsa Bernard
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | [ ERROR ] | ERROR | skipped | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | ERROR | ERROR | skipped | skipped |
| Package: flipflop |
| Version: 1.22.0 |
| Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL flipflop |
| StartedAt: 2019-10-15 18:35:28 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 18:35:33 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 4.8 seconds |
| RetCode: 1 |
| Status: ERROR |
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### Running command:
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### /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL flipflop
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘flipflop’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -I. -Ispams/linalg -Ispams/prox -Ispams/decomp -Ispams/dags -fopenmp -DUSE_BLAS_LIB -DNDEBUG -fpic -g -O2 -Wall -c FileSplitter.cpp -o FileSplitter.o
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c R_init_flipflop.c -o R_init_flipflop.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -I. -Ispams/linalg -Ispams/prox -Ispams/decomp -Ispams/dags -fopenmp -DUSE_BLAS_LIB -DNDEBUG -fpic -g -O2 -Wall -c align.cpp -o align.o
In file included from align.h:5:0,
from align.cpp:5:
commontype.h: In function ‘range_t make_range_t(long int, long int)’:
commontype.h:18:75: error: no matching function for call to ‘make_pair(long int&, long int&)’
inline range_t make_range_t(long a,long b){return make_pair(a,b);}
^
In file included from /usr/include/c++/7/bits/stl_algobase.h:64:0,
from /usr/include/c++/7/bits/char_traits.h:39,
from /usr/include/c++/7/ios:40,
from /usr/include/c++/7/ostream:38,
from /usr/include/c++/7/iostream:39,
from align.cpp:1:
/usr/include/c++/7/bits/stl_pair.h:524:5: note: candidate: template constexpr std::pair::__type, typename std::__decay_and_strip<_T2>::__type> std::make_pair(_T1&&, _T2&&)
make_pair(_T1&& __x, _T2&& __y)
^~~~~~~~~
/usr/include/c++/7/bits/stl_pair.h:524:5: note: template argument deduction/substitution failed:
In file included from align.h:5:0,
from align.cpp:5:
commontype.h:18:75: note: cannot convert ‘a’ (type ‘long int’) to type ‘long int&&’
inline range_t make_range_t(long a,long b){return make_pair(a,b);}
^
align.cpp: In function ‘std::ostream& operator<<(std::ostream&, Align&)’:
align.cpp:11:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=0;i