Package: apeglm

Version: 1.6.0

Command: rm -rf apeglm.buildbin-libdir && mkdir apeglm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=apeglm.buildbin-libdir apeglm_1.6.0.tar.gz

StartedAt: 2019-10-16 08:41:50 -0400 (Wed, 16 Oct 2019)

EndedAt: 2019-10-16 08:43:04 -0400 (Wed, 16 Oct 2019)

EllapsedTime: 74.3 seconds

RetCode: 0

Status:  OK

PackageFile: apeglm_1.6.0.zip

PackageFileSize: 1.006 MiB

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### Running command:
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###   rm -rf apeglm.buildbin-libdir && mkdir apeglm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=apeglm.buildbin-libdir apeglm_1.6.0.tar.gz
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install for i386

* installing *source* package 'apeglm' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nbinomGLM.cpp -o nbinomGLM.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o apeglm.dll tmp.def RcppExports.o nbinomGLM.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/apeglm.buildbin-libdir/00LOCK-apeglm/00new/apeglm/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'apeglm'
    finding HTML links ... done
    apeglm                                  html  
    bbEstDisp                               html  
    logLikNB                                html  
    svalue                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'apeglm' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nbinomGLM.cpp -o nbinomGLM.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o apeglm.dll tmp.def RcppExports.o nbinomGLM.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/apeglm.buildbin-libdir/apeglm/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'apeglm' as apeglm_1.6.0.zip
* DONE (apeglm)