Package: TIN

Version: 1.16.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TIN_1.16.0.tar.gz && rm -rf TIN.buildbin-libdir && mkdir TIN.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TIN.buildbin-libdir TIN_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TIN_1.16.0.zip && rm TIN_1.16.0.tar.gz TIN_1.16.0.zip

StartedAt: 2019-10-15 19:19:40 -0400 (Tue, 15 Oct 2019)

EndedAt: 2019-10-15 19:20:42 -0400 (Tue, 15 Oct 2019)

EllapsedTime: 61.9 seconds

RetCode: 0

Status:  OK

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TIN_1.16.0.tar.gz && rm -rf TIN.buildbin-libdir && mkdir TIN.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TIN.buildbin-libdir TIN_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TIN_1.16.0.zip && rm TIN_1.16.0.tar.gz TIN_1.16.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 4578k  100 4578k    0     0  43.1M      0 --:--:-- --:--:-- --:--:-- 46.5M

install for i386

* installing *source* package 'TIN' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
The following object is masked _by_ package:aroma.affymetrix:

    writeCdf

The following object is masked from package:R.utils:

    findFiles

** help
*** installing help indices
  converting help for package 'TIN'
    finding HTML links ... done
    aberrantExonUsage                       html  
    clusterPlot                             html  
    correlation                             html  
    correlationPlot                         html  
    firmaAnalysis                           html  
    geneAnnotation                          html  
    geneSetCorrelation                      html  
    geneSets                                html  
    posNegCorrPlot                          html  
    probesetPermutations                    html  
    readGeneSummaries                       html  
    sampleSetFirmaScores                    html  
    sampleSetGeneSummaries                  html  
    scatterPlot                             html  
    splicingFactors                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
The following object is masked _by_ package:aroma.affymetrix:

    writeCdf

The following object is masked from package:R.utils:

    findFiles

** testing if installed package can be loaded from final location
The following object is masked _by_ package:aroma.affymetrix:

    writeCdf

The following object is masked from package:R.utils:

    findFiles

** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TIN' ...
** testing if installed package can be loaded
The following object is masked _by_ package:aroma.affymetrix:

    writeCdf

The following object is masked from package:R.utils:

    findFiles

* MD5 sums
packaged installation of 'TIN' as TIN_1.16.0.zip
* DONE (TIN)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'TIN' successfully unpacked and MD5 sums checked