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BUILD BIN report for SeqVarTools on tokay2

This page was generated on 2019-10-16 12:28:22 -0400 (Wed, 16 Oct 2019).

Package 1502/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SeqVarTools 1.22.0
Stephanie M. Gogarten
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/SeqVarTools
Branch: RELEASE_3_9
Last Commit: e2e9bcd
Last Changed Date: 2019-05-09 18:37:15 -0400 (Thu, 09 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SeqVarTools
Version: 1.22.0
Command: rm -rf SeqVarTools.buildbin-libdir && mkdir SeqVarTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SeqVarTools.buildbin-libdir SeqVarTools_1.22.0.tar.gz
StartedAt: 2019-10-16 10:12:31 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 10:13:11 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 39.6 seconds
RetCode: 0
Status:  OK  
PackageFile: SeqVarTools_1.22.0.zip
PackageFileSize: 1.239 MiB

Command output

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### Running command:
###
###   rm -rf SeqVarTools.buildbin-libdir && mkdir SeqVarTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SeqVarTools.buildbin-libdir SeqVarTools_1.22.0.tar.gz
###
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install for i386

* installing *source* package 'SeqVarTools' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SeqVarTools'
    finding HTML links ... done
    Iterator-class                          html  
    finding level-2 HTML links ... done

    SeqVarData-class                        html  
    SeqVarTools-package                     html  
    allele-methods                          html  
    alleleFrequency                         html  
    alternateAlleleDetection                html  
    applyMethod                             html  
    chromWithPAR                            html  
    countSingletons                         html  
    duplicateDiscordance                    html  
    getGenotype                             html  
    getVariableLengthData                   html  
    heterozygosity                          html  
    hwe                                     html  
    imputedDosage                           html  
    inbreedCoeff                            html  
    isSNV                                   html  
    isVariant                               html  
    meanBySample                            html  
    mendelErr                               html  
    missingGenotypeRate                     html  
    pca                                     html  
    pedigree                                html  
    refFrac                                 html  
    regression                              html  
    setVariantID                            html  
    titv                                    html  
    variantInfo                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SeqVarTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SeqVarTools' as SeqVarTools_1.22.0.zip
* DONE (SeqVarTools)