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INSTALL report for Roleswitch on tokay2

This page was generated on 2019-10-16 12:28:30 -0400 (Wed, 16 Oct 2019).

Package 1406/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Roleswitch 1.22.0
Yue Li
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/Roleswitch
Branch: RELEASE_3_9
Last Commit: 61b74c2
Last Changed Date: 2019-05-02 11:53:45 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Roleswitch
Version: 1.22.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Roleswitch_1.22.0.tar.gz && rm -rf Roleswitch.buildbin-libdir && mkdir Roleswitch.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Roleswitch.buildbin-libdir Roleswitch_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Roleswitch_1.22.0.zip && rm Roleswitch_1.22.0.tar.gz Roleswitch_1.22.0.zip
StartedAt: 2019-10-15 19:48:41 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:49:32 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 51.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Roleswitch_1.22.0.tar.gz && rm -rf Roleswitch.buildbin-libdir && mkdir Roleswitch.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Roleswitch.buildbin-libdir Roleswitch_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Roleswitch_1.22.0.zip && rm Roleswitch_1.22.0.tar.gz Roleswitch_1.22.0.zip
###
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100  368k  100  368k    0     0  5253k      0 --:--:-- --:--:-- --:--:-- 5754k

install for i386

* installing *source* package 'Roleswitch' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Roleswitch'
    finding HTML links ... done
    Roleswitch-package                      html  
    diagnosticPlot                          html  
    getSeedMatrix                           html  
    roleswitch                              html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpm8qBPt/R.INSTALL1dac58276d69/Roleswitch/man/roleswitch.Rd:42: file link 'eSet' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpm8qBPt/R.INSTALL1dac58276d69/Roleswitch/man/roleswitch.Rd:42: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpm8qBPt/R.INSTALL1dac58276d69/Roleswitch/man/roleswitch.Rd:45: file link 'eSet' in package 'Biobase' does not exist and so has been treated as a topic
    tcga_gbm_testdata                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Roleswitch' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Roleswitch' as Roleswitch_1.22.0.zip
* DONE (Roleswitch)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'Roleswitch' successfully unpacked and MD5 sums checked