Package: PGA

Version: 1.14.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PGA_1.14.0.tar.gz && rm -rf PGA.buildbin-libdir && mkdir PGA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PGA.buildbin-libdir PGA_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PGA_1.14.0.zip && rm PGA_1.14.0.tar.gz PGA_1.14.0.zip

StartedAt: 2019-10-15 20:36:50 -0400 (Tue, 15 Oct 2019)

EndedAt: 2019-10-15 20:38:18 -0400 (Tue, 15 Oct 2019)

EllapsedTime: 88.0 seconds

RetCode: 0

Status:  OK

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PGA_1.14.0.tar.gz && rm -rf PGA.buildbin-libdir && mkdir PGA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PGA.buildbin-libdir PGA_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PGA_1.14.0.zip && rm PGA_1.14.0.tar.gz PGA_1.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3989k  100 3989k    0     0  8136k      0 --:--:-- --:--:-- --:--:-- 8241k

install for i386

* installing *source* package 'PGA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PGA'
    finding HTML links ... done
    PrepareAnnotationEnsembl2               html  
    finding level-2 HTML links ... done

    PrepareAnnotationRefseq2                html  
    addGeneName4Ensembl                     html  
    createProDB4DenovoRNASeq                html  
    dbCreator                               html  
    easyRun                                 html  
    parserGear                              html  
    reportGear                              html  
    runTandem                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'PGA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PGA' as PGA_1.14.0.zip
* DONE (PGA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'PGA' successfully unpacked and MD5 sums checked