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INSTALL report for Logolas on tokay2

This page was generated on 2019-10-16 12:37:50 -0400 (Wed, 16 Oct 2019).

Package 883/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Logolas 1.8.0
Kushal Dey
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/Logolas
Branch: RELEASE_3_9
Last Commit: ed79448
Last Changed Date: 2019-05-02 11:54:05 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Logolas
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Logolas_1.8.0.tar.gz && rm -rf Logolas.buildbin-libdir && mkdir Logolas.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Logolas.buildbin-libdir Logolas_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Logolas_1.8.0.zip && rm Logolas_1.8.0.tar.gz Logolas_1.8.0.zip
StartedAt: 2019-10-15 19:38:52 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:39:50 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 58.1 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Logolas_1.8.0.tar.gz && rm -rf Logolas.buildbin-libdir && mkdir Logolas.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Logolas.buildbin-libdir Logolas_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Logolas_1.8.0.zip && rm Logolas_1.8.0.tar.gz Logolas_1.8.0.zip
###
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100 1228k  100 1228k    0     0  16.7M      0 --:--:-- --:--:-- --:--:-- 18.4M

install for i386

* installing *source* package 'Logolas' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Logolas'
    finding HTML links ... done
    EBF1_disc1                              html  
    GetConsensusSeq                         html  
    UMI                                     html  
    aRxiv                                   html  
    get_logo_heights                        html  
    get_plot                                html  
    get_viewport_logo                       html  
    himalayan_fauna                         html  
    histone_marks                           html  
    logo_pssm                               html  
    logomaker                               html  
    makemylogo                              html  
    mutation_sig                            html  
    nlogomaker                              html  
    plogomaker                              html  
    pssm                                    html  
    seqlogo_example                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Logolas' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Logolas' as Logolas_1.8.0.zip
* DONE (Logolas)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'Logolas' successfully unpacked and MD5 sums checked