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INSTALL report for DEFormats on tokay2

This page was generated on 2019-10-16 12:35:26 -0400 (Wed, 16 Oct 2019).

Package 406/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DEFormats 1.12.0
Andrzej OleÅ›
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/DEFormats
Branch: RELEASE_3_9
Last Commit: 02c6ec6
Last Changed Date: 2019-05-02 11:54:01 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: DEFormats
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DEFormats_1.12.0.tar.gz && rm -rf DEFormats.buildbin-libdir && mkdir DEFormats.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEFormats.buildbin-libdir DEFormats_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DEFormats_1.12.0.zip && rm DEFormats_1.12.0.tar.gz DEFormats_1.12.0.zip
StartedAt: 2019-10-15 20:41:00 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:41:44 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 44.0 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DEFormats_1.12.0.tar.gz && rm -rf DEFormats.buildbin-libdir && mkdir DEFormats.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEFormats.buildbin-libdir DEFormats_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DEFormats_1.12.0.zip && rm DEFormats_1.12.0.tar.gz DEFormats_1.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  9157  100  9157    0     0  70577      0 --:--:-- --:--:-- --:--:-- 75057

install for i386

* installing *source* package 'DEFormats' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'DGEList' from 'edgeR' in package 'DEFormats'
    (from the saved implicit definition)
** help
*** installing help indices
  converting help for package 'DEFormats'
    finding HTML links ... done
    DEFormats                               html  
    finding level-2 HTML links ... done

    DGEList                                 html  
    as.DESeqDataSet                         html  
    as.DGEList                              html  
    simulateNormFactors                     html  
    simulateRnaSeqData                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DEFormats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DEFormats' as DEFormats_1.12.0.zip
* DONE (DEFormats)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'DEFormats' successfully unpacked and MD5 sums checked