Package: CNVRanger

Version: 1.0.3

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CNVRanger_1.0.3.tar.gz && rm -rf CNVRanger.buildbin-libdir && mkdir CNVRanger.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVRanger.buildbin-libdir CNVRanger_1.0.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CNVRanger_1.0.3.zip && rm CNVRanger_1.0.3.tar.gz CNVRanger_1.0.3.zip

StartedAt: 2019-10-15 20:57:53 -0400 (Tue, 15 Oct 2019)

EndedAt: 2019-10-15 20:59:04 -0400 (Tue, 15 Oct 2019)

EllapsedTime: 70.6 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CNVRanger_1.0.3.tar.gz && rm -rf CNVRanger.buildbin-libdir && mkdir CNVRanger.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVRanger.buildbin-libdir CNVRanger_1.0.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CNVRanger_1.0.3.zip && rm CNVRanger_1.0.3.tar.gz CNVRanger_1.0.3.zip
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install for i386

* installing *source* package 'CNVRanger' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CNVRanger'
    finding HTML links ... done
    cnvEQTL                                 html  
    finding level-2 HTML links ... done

    cnvGWAS                                 html  
    generateGDS                             html  
    importLrrBaf                            html  
    plotEQTL                                html  
    plotManhattan                           html  
    plotRecurrentRegions                    html  
    populationRanges                        html  
    setupCnvGWAS                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CNVRanger' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNVRanger' as CNVRanger_1.0.3.zip
* DONE (CNVRanger)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CNVRanger' successfully unpacked and MD5 sums checked