Helena L. Crowell
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/CATALYST |
| Branch: RELEASE_3_9 |
| Last Commit: e1bc86f |
| Last Changed Date: 2019-10-14 12:05:43 -0400 (Mon, 14 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:38:17 -0400 (Wed, 16 Oct 2019).
| Package 214/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CATALYST 1.8.7 Helena L. Crowell
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: CATALYST |
| Version: 1.8.7 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CATALYST_1.8.7.tar.gz && rm -rf CATALYST.buildbin-libdir && mkdir CATALYST.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CATALYST.buildbin-libdir CATALYST_1.8.7.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CATALYST_1.8.7.zip && rm CATALYST_1.8.7.tar.gz CATALYST_1.8.7.zip |
| StartedAt: 2019-10-15 21:05:40 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 21:07:25 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 104.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CATALYST_1.8.7.tar.gz && rm -rf CATALYST.buildbin-libdir && mkdir CATALYST.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CATALYST.buildbin-libdir CATALYST_1.8.7.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CATALYST_1.8.7.zip && rm CATALYST_1.8.7.tar.gz CATALYST_1.8.7.zip
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install for i386
* installing *source* package 'CATALYST' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'filter' in package 'CATALYST'
** help
*** installing help indices
converting help for package 'CATALYST'
finding HTML links ... done
adaptSpillmat html
applyCutoffs html
assignPrelim html
finding level-2 HTML links ... done
cluster html
compCytof html
computeSpillmat html
concatFCS html
daFrame-class html
daFrame-methods html
data html
dbFrame-class html
dbFrame-methods html
estCutoffs html
extractClusters html
filter html
guessPanel html
launchGUI html
mergeClusters html
normCytof html
outFCS html
outFrames html
plotAbundances html
plotClusterExprs html
plotClusterHeatmap html
plotCodes html
plotCounts html
plotDR html
plotDiffHeatmap html
plotEvents html
plotExprHeatmap html
plotExprs html
plotMDS html
plotMahal html
plotMedExprs html
plotNRS html
plotSpillmat html
plotYields html
runDR html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CATALYST' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CATALYST' as CATALYST_1.8.7.zip
* DONE (CATALYST)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CATALYST' successfully unpacked and MD5 sums checked