David Jenkins
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/singleCellTK |
| Branch: master |
| Last Commit: e66c754 |
| Last Changed Date: 2019-04-03 20:36:32 -0400 (Wed, 03 Apr 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:38:34 -0400 (Tue, 09 Apr 2019).
| Package 1502/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| singleCellTK 1.3.7 David Jenkins
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: singleCellTK |
| Version: 1.3.7 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/singleCellTK_1.3.7.tar.gz && rm -rf singleCellTK.buildbin-libdir && mkdir singleCellTK.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=singleCellTK.buildbin-libdir singleCellTK_1.3.7.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL singleCellTK_1.3.7.zip && rm singleCellTK_1.3.7.tar.gz singleCellTK_1.3.7.zip |
| StartedAt: 2019-04-08 20:31:29 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 20:33:06 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 97.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/singleCellTK_1.3.7.tar.gz && rm -rf singleCellTK.buildbin-libdir && mkdir singleCellTK.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=singleCellTK.buildbin-libdir singleCellTK_1.3.7.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL singleCellTK_1.3.7.zip && rm singleCellTK_1.3.7.tar.gz singleCellTK_1.3.7.zip
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install for i386
* installing *source* package 'singleCellTK' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'singleCellTK'
finding HTML links ... done
ComBatSCE html
DownsampleCells html
DownsampleDepth html
MAST html
SCtkExperiment-class html
SCtkExperiment html
alignSingleCellData html
calcEffectSizes html
convertGeneIDs html
createSCE html
distinctColors html
enrichRSCE html
filterSCData html
generateSimulatedData html
getBiomarker html
getClusterInputData html
getPCA html
getTSNE html
getUMAP html
gsvaSCE html
iterateSimulations html
mouseBrainSubsetSCE html
parseRsubreadLogs html
pcaVariances-set html
pcaVariances html
plotBatchVariance html
plotBiomarker html
plotDiffEx html
plotPCA html
plotTSNE html
plotUMAP html
saveBiomarkerRes html
saveDiffExResults html
scDiffEx html
singleCellTK html
subDiffEx html
summarizeTable html
visPlot html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'singleCellTK' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'singleCellTK' as singleCellTK_1.3.7.zip
* DONE (singleCellTK)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'singleCellTK' successfully unpacked and MD5 sums checked