Package: branchpointer

Version: 1.9.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/branchpointer_1.9.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.9.0.zip && rm branchpointer_1.9.0.tar.gz branchpointer_1.9.0.zip

StartedAt: 2019-04-08 20:29:23 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 20:31:02 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 98.7 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/branchpointer_1.9.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.9.0.zip && rm branchpointer_1.9.0.tar.gz branchpointer_1.9.0.zip
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install for i386

* installing *source* package 'branchpointer' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'branchpointer'
    finding HTML links ... done
    exonsToIntrons                          html  
    getBranchpointSequence                  html  
    getCanonical3SS                         html  
    getExonDists                            html  
    getPPT                                  html  
    getQueryLoc                             html  
    gtfToExons                              html  
    makeBranchpointWindowForExons           html  
    makeBranchpointWindowForSNP             html  
    plotBranchpointWindow                   html  
    plotStructure                           html  
    predictBranchpoints                     html  
    predictionsToSummary                    html  
    readQueryFile                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'branchpointer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'branchpointer' as branchpointer_1.9.0.zip
* DONE (branchpointer)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'branchpointer' successfully unpacked and MD5 sums checked