##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL apeglm
###
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘apeglm’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include" -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128> { enum { value = true }; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128i> { enum { value = true }; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128d> { enum { value = true }; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4f>
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4i>
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet2d>
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4f,4>& kernel) {
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet2d,2>& kernel) {
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4i,4>& kernel) {
^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:374:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include" -I/usr/local/include -fpic -g -O2 -Wall -c nbinomGLM.cpp -o nbinomGLM.o
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128> { enum { value = true }; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128i> { enum { value = true }; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128d> { enum { value = true }; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4f>
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4i>
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet2d>
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4f,4>& kernel) {
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet2d,2>& kernel) {
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4i,4>& kernel) {
^
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:374:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/../Func.h:18:35: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/../Func.h:18:35: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:636:45: required from ‘class Numer::Integrator<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:25:29: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:106:50: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:58:34: required from ‘class Eigen::RefBase<Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:234:77: required from ‘class Eigen::Ref<const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:107:31: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:123:27: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:130:53: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:130:53: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:58:34: required from ‘class Eigen::RefBase<Eigen::Ref<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:192:76: required from ‘class Eigen::Ref<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:25:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:811:41: required from ‘struct Eigen::internal::mapbase_evaluator<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:896:8: required from ‘struct Eigen::internal::evaluator<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:936:8: required from ‘struct Eigen::internal::evaluator<Eigen::Ref<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:43:26: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<double, -1, 1> > >::match<Eigen::Ref<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:199:63: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Matrix<double, -1, 1> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<double, -1, 1> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Ref<Eigen::Matrix<double, -1, 1> >]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:25:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:471:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h: In member function ‘double Numer::LBFGSFun::operator()(const VectorXd&, Eigen::VectorXd&)’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:208:30: note: after user-defined conversion: Eigen::Ref<PlainObjectType, Options, StrideType>::Ref(Eigen::PlainObjectBase<OtherDerived>&, typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits<Eigen::Ref<PlainObjectType, RefOptions, StrideType> >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Matrix<double, -1, 1>; PlainObjectType = Eigen::Matrix<double, -1, 1>; int Options = 0; StrideType = Eigen::InnerStride<1>; typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits<Eigen::Ref<PlainObjectType, RefOptions, StrideType> >::match<Derived>::MatchAtCompileTime), Derived>::type = Eigen::Matrix<double, -1, 1>]
EIGEN_DEVICE_FUNC inline Ref(PlainObjectBase<Derived>& expr,
^˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:13:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:16,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/../Func.h:52:20: note: initializing argument 2 of ‘virtual double Numer::MFuncGrad::f_grad(Numer::Constvec&, Numer::Refvec)’
virtual double f_grad(Constvec& x, Refvec grad) = 0;
^˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:27:31: required from ‘class LBFGSpp::LBFGSSolver<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:49:46: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >’
nbinomGLM.cpp:13:16: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >’
nbinomGLM.cpp:15:16: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0, 7>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>’
nbinomGLM.cpp:33:52: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’
nbinomGLM.cpp:33:60: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
nbinomGLM.cpp:33:60: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_exp_op<double>, const Eigen::Array<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_exp_op<double>, const Eigen::Array<double, -1, 1> >’
nbinomGLM.cpp:34:50: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
nbinomGLM.cpp:36:49: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
nbinomGLM.cpp:36:49: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
nbinomGLM.cpp:37:46: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >’
nbinomGLM.cpp:39:48: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> >’
nbinomGLM.cpp:39:74: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > >’
nbinomGLM.cpp:39:74: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<double>, const Eigen::Array<double, -1, 1> > > >’
nbinomGLM.cpp:39:74: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >’
nbinomGLM.cpp:40:34: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<Eigen::Matrix<double, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
nbinomGLM.cpp:40:59: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> >’
nbinomGLM.cpp:42:43: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> >’
nbinomGLM.cpp:42:61: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > >’
nbinomGLM.cpp:42:61: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, const Eigen::Array<double, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_log_op<double>, const Eigen::Array<double, -1, 1> > > >’
nbinomGLM.cpp:42:61: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
nbinomGLM.cpp:43:50: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > >, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > >’
nbinomGLM.cpp:67:51: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >’
nbinomGLM.cpp:67:51: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >’
nbinomGLM.cpp:67:51: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1, 1, -1, -1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1, 1, -1, -1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1, 1, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1, 1, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1, 1, -1, -1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1, 1, -1, -1>’
nbinomGLM.cpp:67:55: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0, 7>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>’
nbinomGLM.cpp:67:55: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
nbinomGLM.cpp:68:30: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
nbinomGLM.cpp:68:54: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, 1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>’
nbinomGLM.cpp:117:16: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<double>, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:99:27: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:142:32: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:162:47: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:162:47: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 8>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 8, 1, 0, 8, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 8, 1, 0, 8, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 8, 1, 0, 8, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 8, 1, 0, 8, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:189:28: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 8, 1, 0, 8, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 8, 1, 0, 8, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 8, 1, 0, 8, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 8, 1, 0, 8, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 8, 1, 0, 8, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 8, 1, 0, 8, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 8, 1, 0, 8, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:189:28: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 4, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 4, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:215:28: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 11>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 11, 1, 0, 11, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 11, 1, 0, 11, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 11, 1, 0, 11, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 11, 1, 0, 11, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:235:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 11, 1, 0, 11, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 11, 1, 0, 11, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 11, 1, 0, 11, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 11, 1, 0, 11, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 11, 1, 0, 11, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 11, 1, 0, 11, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 11, 1, 0, 11, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:235:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 5>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 5, 1, 0, 5, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 5, 1, 0, 5, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 5, 1, 0, 5, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 5, 1, 0, 5, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:267:28: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 5, 1, 0, 5, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 5, 1, 0, 5, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 5, 1, 0, 5, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 5, 1, 0, 5, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 5, 1, 0, 5, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 5, 1, 0, 5, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 5, 1, 0, 5, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:267:28: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 16>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 16, 1, 0, 16, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 16, 1, 0, 16, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 16, 1, 0, 16, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 16, 1, 0, 16, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:289:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 16, 1, 0, 16, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 16, 1, 0, 16, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 16, 1, 0, 16, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 16, 1, 0, 16, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 16, 1, 0, 16, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 16, 1, 0, 16, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 16, 1, 0, 16, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:289:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 21>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 21, 1, 0, 21, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 21, 1, 0, 21, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 21, 1, 0, 21, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 21, 1, 0, 21, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:359:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 21, 1, 0, 21, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 21, 1, 0, 21, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 21, 1, 0, 21, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 21, 1, 0, 21, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 21, 1, 0, 21, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 21, 1, 0, 21, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 21, 1, 0, 21, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:359:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 10>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 10, 1, 0, 10, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 10, 1, 0, 10, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 10, 1, 0, 10, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 10, 1, 0, 10, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:411:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 10, 1, 0, 10, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 10, 1, 0, 10, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 10, 1, 0, 10, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 10, 1, 0, 10, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 10, 1, 0, 10, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 10, 1, 0, 10, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 10, 1, 0, 10, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:411:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 26>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 26, 1, 0, 26, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 26, 1, 0, 26, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 26, 1, 0, 26, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 26, 1, 0, 26, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:443:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 26, 1, 0, 26, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 26, 1, 0, 26, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 26, 1, 0, 26, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 26, 1, 0, 26, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 26, 1, 0, 26, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 26, 1, 0, 26, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 26, 1, 0, 26, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:443:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 13>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 13, 1, 0, 13, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 13, 1, 0, 13, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 13, 1, 0, 13, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 13, 1, 0, 13, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:505:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 13, 1, 0, 13, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 13, 1, 0, 13, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 13, 1, 0, 13, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 13, 1, 0, 13, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 13, 1, 0, 13, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 13, 1, 0, 13, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 13, 1, 0, 13, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:505:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 31>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 31, 1, 0, 31, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 31, 1, 0, 31, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 31, 1, 0, 31, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 31, 1, 0, 31, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:543:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 31, 1, 0, 31, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 31, 1, 0, 31, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 31, 1, 0, 31, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 31, 1, 0, 31, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 31, 1, 0, 31, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 31, 1, 0, 31, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 31, 1, 0, 31, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:543:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 15>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 15, 1, 0, 15, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 15, 1, 0, 15, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 15, 1, 0, 15, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 15, 1, 0, 15, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:615:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 15, 1, 0, 15, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 15, 1, 0, 15, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 15, 1, 0, 15, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 15, 1, 0, 15, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 15, 1, 0, 15, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 15, 1, 0, 15, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 15, 1, 0, 15, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:615:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 36>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 36, 1, 0, 36, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 36, 1, 0, 36, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 36, 1, 0, 36, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 36, 1, 0, 36, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:657:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 36, 1, 0, 36, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 36, 1, 0, 36, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 36, 1, 0, 36, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 36, 1, 0, 36, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 36, 1, 0, 36, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 36, 1, 0, 36, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 36, 1, 0, 36, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:657:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 18>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 18, 1, 0, 18, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 18, 1, 0, 18, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 18, 1, 0, 18, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 18, 1, 0, 18, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:739:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 18, 1, 0, 18, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 18, 1, 0, 18, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 18, 1, 0, 18, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 18, 1, 0, 18, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 18, 1, 0, 18, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 18, 1, 0, 18, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 18, 1, 0, 18, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:739:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 41>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 41, 1, 0, 41, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 41, 1, 0, 41, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 41, 1, 0, 41, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 41, 1, 0, 41, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:787:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 41, 1, 0, 41, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 41, 1, 0, 41, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 41, 1, 0, 41, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 41, 1, 0, 41, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 41, 1, 0, 41, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 41, 1, 0, 41, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 41, 1, 0, 41, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:787:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 20>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 20, 1, 0, 20, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 20, 1, 0, 20, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 20, 1, 0, 20, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 20, 1, 0, 20, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:879:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 20, 1, 0, 20, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 20, 1, 0, 20, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 20, 1, 0, 20, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 20, 1, 0, 20, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 20, 1, 0, 20, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 20, 1, 0, 20, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 20, 1, 0, 20, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:879:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 46>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 46, 1, 0, 46, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 46, 1, 0, 46, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 46, 1, 0, 46, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 46, 1, 0, 46, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:931:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 46, 1, 0, 46, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 46, 1, 0, 46, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 46, 1, 0, 46, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 46, 1, 0, 46, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 46, 1, 0, 46, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 46, 1, 0, 46, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 46, 1, 0, 46, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:931:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 23>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 23, 1, 0, 23, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 23, 1, 0, 23, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 23, 1, 0, 23, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 23, 1, 0, 23, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1033:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 23, 1, 0, 23, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 23, 1, 0, 23, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 23, 1, 0, 23, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 23, 1, 0, 23, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 23, 1, 0, 23, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 23, 1, 0, 23, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 23, 1, 0, 23, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1033:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 51>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 51, 1, 0, 51, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 51, 1, 0, 51, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 51, 1, 0, 51, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 51, 1, 0, 51, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1091:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 51, 1, 0, 51, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 51, 1, 0, 51, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 51, 1, 0, 51, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 51, 1, 0, 51, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 51, 1, 0, 51, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 51, 1, 0, 51, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 51, 1, 0, 51, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1091:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 25>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 25, 1, 0, 25, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 25, 1, 0, 25, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 25, 1, 0, 25, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 25, 1, 0, 25, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1203:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 25, 1, 0, 25, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 25, 1, 0, 25, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 25, 1, 0, 25, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 25, 1, 0, 25, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 25, 1, 0, 25, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 25, 1, 0, 25, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 25, 1, 0, 25, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1203:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 61>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 61, 1, 0, 61, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 61, 1, 0, 61, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 61, 1, 0, 61, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 61, 1, 0, 61, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1265:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 61, 1, 0, 61, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 61, 1, 0, 61, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 61, 1, 0, 61, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 61, 1, 0, 61, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 61, 1, 0, 61, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 61, 1, 0, 61, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 61, 1, 0, 61, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1265:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 30>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 30, 1, 0, 30, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 30, 1, 0, 30, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 30, 1, 0, 30, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 30, 1, 0, 30, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1397:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 30, 1, 0, 30, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 30, 1, 0, 30, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 30, 1, 0, 30, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 30, 1, 0, 30, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 30, 1, 0, 30, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 30, 1, 0, 30, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 30, 1, 0, 30, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1397:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 101>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 101, 1, 0, 101, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 101, 1, 0, 101, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 101, 1, 0, 101, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 101, 1, 0, 101, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1469:30: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 101, 1, 0, 101, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 101, 1, 0, 101, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 101, 1, 0, 101, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 101, 1, 0, 101, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 101, 1, 0, 101, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 101, 1, 0, 101, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 101, 1, 0, 101, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1469:30: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 50>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 50, 1, 0, 50, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 50, 1, 0, 50, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 50, 1, 0, 50, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 50, 1, 0, 50, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1681:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 50, 1, 0, 50, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 50, 1, 0, 50, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 50, 1, 0, 50, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 50, 1, 0, 50, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 50, 1, 0, 50, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 50, 1, 0, 50, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 50, 1, 0, 50, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/GaussKronrodNodesWeights.h:1681:29: required from ‘class Numer::QuadratureKronrod<double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, 2>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::InnerStride<1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:811:41: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_product_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:487:70: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::prod() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:123:39: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS/LineSearch.h:69:37: required from ‘static void LBFGSpp::LineSearch<Scalar>::Backtracking(Foo&, Scalar&, LBFGSpp::LineSearch<Scalar>::Vector&, LBFGSpp::LineSearch<Scalar>::Vector&, Scalar&, const Vector&, const Vector&, const LBFGSpp::LBFGSParam<Scalar>&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LineSearch<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:112:45: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS/LineSearch.h:69:30: required from ‘static void LBFGSpp::LineSearch<Scalar>::Backtracking(Foo&, Scalar&, LBFGSpp::LineSearch<Scalar>::Vector&, LBFGSpp::LineSearch<Scalar>::Vector&, Scalar&, const Vector&, const Vector&, const LBFGSpp::LBFGSParam<Scalar>&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LineSearch<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:112:45: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:148:20: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:20:67: required from ‘Derived& Eigen::DenseBase<Derived>::operator*=(const Scalar&) [with Derived = Eigen::Matrix<double, -1, 1>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:165:19: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 7>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 7, 1, 0, 7, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 7, 1, 0, 7, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 8; int numGaussRows = 4; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 7, 1, 0, 7, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 7, 1, 0, 7, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 7, 1, 0, 7, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 7, 1, 0, 7, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 7, 1, 0, 7, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 7, 1, 0, 7, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 8; int numGaussRows = 4; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 8; int numGaussRows = 4; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 8; int numGaussRows = 4; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 8, 1, 0, 8, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 8; int numGaussRows = 4; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 8; int numGaussRows = 4; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 11; int numGaussRows = 5; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:454:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 11; int numGaussRows = 5; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:454:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 11, 1, 0, 11, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 11; int numGaussRows = 5; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:454:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 11; int numGaussRows = 5; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:454:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 16; int numGaussRows = 8; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:460:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 16; int numGaussRows = 8; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:460:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 16, 1, 0, 16, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 16; int numGaussRows = 8; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:460:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 16; int numGaussRows = 8; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:460:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 21; int numGaussRows = 10; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:466:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 21; int numGaussRows = 10; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:466:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 21, 1, 0, 21, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 21; int numGaussRows = 10; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:466:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 21; int numGaussRows = 10; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:466:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 26; int numGaussRows = 13; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:472:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 26; int numGaussRows = 13; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:472:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 26, 1, 0, 26, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 26; int numGaussRows = 13; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:472:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 26; int numGaussRows = 13; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:472:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 31; int numGaussRows = 15; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:478:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 31; int numGaussRows = 15; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:478:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 31, 1, 0, 31, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 31; int numGaussRows = 15; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:478:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 31; int numGaussRows = 15; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:478:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 71>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 71, 1, 0, 71, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 71, 1, 0, 71, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 71, 1, 0, 71, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 71, 1, 0, 71, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 71, 1, 0, 71, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 71, 1, 0, 71, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 71, 1, 0, 71, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 71, 1, 0, 71, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 71, 1, 0, 71, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 71, 1, 0, 71, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 71, 1, 0, 71, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 35>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 35, 1, 0, 35, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 35, 1, 0, 35, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 35, 1, 0, 35, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 35, 1, 0, 35, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 35, 1, 0, 35, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 35, 1, 0, 35, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 35, 1, 0, 35, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 35, 1, 0, 35, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 36, 1, 0, 36, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 81>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 81, 1, 0, 81, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 81, 1, 0, 81, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 81, 1, 0, 81, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 81, 1, 0, 81, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 81, 1, 0, 81, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 81, 1, 0, 81, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 81, 1, 0, 81, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 81, 1, 0, 81, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 81, 1, 0, 81, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 81, 1, 0, 81, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 81, 1, 0, 81, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 40>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 40, 1, 0, 40, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 40, 1, 0, 40, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 40, 1, 0, 40, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 40, 1, 0, 40, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 40, 1, 0, 40, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 40, 1, 0, 40, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 40, 1, 0, 40, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 40, 1, 0, 40, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 41, 1, 0, 41, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 91>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 91, 1, 0, 91, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 91, 1, 0, 91, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 91, 1, 0, 91, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 91, 1, 0, 91, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 91, 1, 0, 91, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 91, 1, 0, 91, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 91, 1, 0, 91, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 91, 1, 0, 91, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 91, 1, 0, 91, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 91, 1, 0, 91, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 91, 1, 0, 91, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 45>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 45, 1, 0, 45, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 45, 1, 0, 45, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 45, 1, 0, 45, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 45, 1, 0, 45, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 45, 1, 0, 45, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 45, 1, 0, 45, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 45, 1, 0, 45, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 45, 1, 0, 45, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 46, 1, 0, 46, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 51; int numGaussRows = 25; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:502:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 51; int numGaussRows = 25; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:502:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 51, 1, 0, 51, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 51; int numGaussRows = 25; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:502:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 51; int numGaussRows = 25; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:502:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 121>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 121, 1, 0, 121, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 121, 1, 0, 121, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 121, 1, 0, 121, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 121, 1, 0, 121, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 121, 1, 0, 121, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 121, 1, 0, 121, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 121, 1, 0, 121, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 121, 1, 0, 121, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 121, 1, 0, 121, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 121, 1, 0, 121, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 121, 1, 0, 121, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 60>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 60, 1, 0, 60, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 60, 1, 0, 60, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 60, 1, 0, 60, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 60, 1, 0, 60, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 60, 1, 0, 60, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 60, 1, 0, 60, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 60, 1, 0, 60, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 60, 1, 0, 60, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 61, 1, 0, 61, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 201>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 201, 1, 0, 201, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 201, 1, 0, 201, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 201, 1, 0, 201, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 201, 1, 0, 201, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 201, 1, 0, 201, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 201, 1, 0, 201, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 201, 1, 0, 201, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 201, 1, 0, 201, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 201, 1, 0, 201, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 201, 1, 0, 201, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, 201, 1, 0, 201, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:542:57: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 100>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 100, 1, 0, 100, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, 100, 1, 0, 100, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 100, 1, 0, 100, 1>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 100, 1, 0, 100, 1>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, 100, 1, 0, 100, 1>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, 100, 1, 0, 100, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, 100, 1, 0, 100, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, 100, 1, 0, 100, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:559:67: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:36: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<double, 101, 1, 0, 101, 1>, -1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:47: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:34: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:87:16: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:48: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; U = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; Derived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:147:20: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:48: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; U = Eigen::Matrix<double, -1, 1>; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:161:44: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_product_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_product_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:487:70: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::prod() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, const Eigen::Ref<const Eigen::Matrix<double, -1, 1> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:123:39: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:48: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Matrix<double, -1, 1>; U = Eigen::Matrix<double, -1, 1>; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS/LineSearch.h:57:22: required from ‘static void LBFGSpp::LineSearch<Scalar>::Backtracking(Foo&, Scalar&, LBFGSpp::LineSearch<Scalar>::Vector&, LBFGSpp::LineSearch<Scalar>::Vector&, Scalar&, const Vector&, const Vector&, const LBFGSpp::LBFGSParam<Scalar>&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LineSearch<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:112:45: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Array<double, -1, 1>; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::Array<double, -1, 1> >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
nbinomGLM.cpp:64:36: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 7, 1, 0, 7, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 8, 1, 0, 8, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 8; int numGaussRows = 4; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:448:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
enum {
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 10, 1, 0, 10, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 11, 1, 0, 11, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 11; int numGaussRows = 5; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:454:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 15, 1, 0, 15, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 16, 1, 0, 16, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 16; int numGaussRows = 8; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:460:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 20, 1, 0, 20, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 21, 1, 0, 21, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 21; int numGaussRows = 10; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:466:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 25, 1, 0, 25, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 26, 1, 0, 26, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 26; int numGaussRows = 13; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:472:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 30, 1, 0, 30, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 31, 1, 0, 31, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 31; int numGaussRows = 15; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:478:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 51; int numGaussRows = 25; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:502:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:22: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:148:20: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1337:8: required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array<double, -1, 1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::ArrayWrapper<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:33:60: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
enum {
^
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::Matrix<double, -1, 1>; Functor = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::Matrix<double, -1, 1>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::Matrix<double, -1, 1>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::Matrix<double, -1, 1>; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>]’
nbinomGLM.cpp:117:20: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 35, 1, 0, 35, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 36, 1, 0, 36, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 36; int numGaussRows = 18; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:484:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 40, 1, 0, 40, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 41, 1, 0, 41, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 41; int numGaussRows = 20; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:490:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 45, 1, 0, 45, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 46, 1, 0, 46, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 46; int numGaussRows = 23; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:496:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 50, 1, 0, 50, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 51, 1, 0, 51, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 51; int numGaussRows = 25; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:502:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 60, 1, 0, 60, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 61, 1, 0, 61, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 61; int numGaussRows = 30; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:508:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double, double>, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Array<double, 100, 1, 0, 100, 1>, 0, Eigen::Stride<0, 0> > >, const Eigen::Block<Eigen::Array<double, 101, 1, 0, 101, 1>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:579:23: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrodHelper(Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numKronrodRows, 1, alignment, numKronrodRows, 1>, Eigen::Array<Scalar_, numGaussRows, 1, alignment, numGaussRows, 1>, const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; int numKronrodRows = 101; int numGaussRows = 50; int alignment = 0; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:514:41: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureKronrod(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::Scalar&, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/Integrator.h:116:44: required from ‘Numer::Integrator<Scalar_>::Scalar Numer::Integrator<Scalar_>::quadratureAdaptive(const FunctionType&, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::Scalar, Numer::Integrator<Scalar_>::QuadratureRule) [with FunctionType = Numer::Func; Scalar_ = double; Numer::Integrator<Scalar_>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/integration/wrapper.h:29:82: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:22: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:110:34: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::norm() const [with Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:87:16: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:52: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; U = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; Derived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:147:20: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:52: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; U = Eigen::Matrix<double, -1, 1>; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:161:44: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:52: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Matrix<double, -1, 1>; U = Eigen::Matrix<double, -1, 1>; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS/LineSearch.h:57:22: required from ‘static void LBFGSpp::LineSearch<Scalar>::Backtracking(Foo&, Scalar&, LBFGSpp::LineSearch<Scalar>::Vector&, LBFGSpp::LineSearch<Scalar>::Vector&, Scalar&, const Vector&, const Vector&, const LBFGSpp::LBFGSParam<Scalar>&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LineSearch<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/LBFGS.h:112:45: required from ‘int LBFGSpp::LBFGSSolver<Scalar>::minimize(Foo&, LBFGSpp::LBFGSSolver<Scalar>::Vector&, Scalar&) [with Foo = Numer::LBFGSFun; Scalar = double; LBFGSpp::LBFGSSolver<Scalar>::Vector = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/optimization/wrapper.h:56:40: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Array<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Array<double, -1, 1>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:21: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, 0, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, false, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Dest = Eigen::Array<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:75:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
^˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:76:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
^˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:77:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
^˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<Eigen::Array<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<Eigen::Array<double, -1, 1> >, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<Eigen::Array<double, -1, 1> >, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<Eigen::Array<double, -1, 1> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper<Eigen::Array<double, -1, 1> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:287:25: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:287:40: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Dest = Eigen::Array<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:339:132: required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Dest = Eigen::Array<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:67:55: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:351:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
^˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:352:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
^˜˜˜˜˜˜˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:353:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
^˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 1>, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 1>, -1, 1, true>, 1>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 1>, -1, 1, true>, 3>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, -1, 1>, -1, 1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, -1, 1>, -1, 1, true> >’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, -1, 1>, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:67:55: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘static void Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar = double]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Dest = Eigen::Array<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
conj_helper<LhsPacket,RhsPacket,ConjugateLhs,ConjugateRhs> pcj;
^˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘static void Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar*, Index, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar = double]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:339:132: required from ‘static void Eigen::internal::gemv_dense_selector<2, 1, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Dest = Eigen::Array<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1, 1, -1, -1> >, const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> > > >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:67:55: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:385:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
conj_helper<LhsPacket,RhsPacket,ConjugateLhs,ConjugateRhs> pcj;
^˜˜
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:385:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Core:368:0,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from /home/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include/RcppNumerical.h:10,
from nbinomGLM.cpp:4:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In instantiation of ‘Index Eigen::internal::first_default_aligned(const Scalar*, Index) [with Scalar = double; Index = long int]’:
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:128:55: required from ‘static void Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Dest = Eigen::Array<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Array<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Ref<const Eigen::Matrix<double, -1, 1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; Derived = Eigen::Array<double, -1, 1>]’
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:244:29: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase<OtherDerived>&, typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Ref<const Eigen::Matrix<double, -1, 1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if<Eigen::internal::is_convertible<typename OtherDerived::Scalar, typename Eigen::internal::traits<Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols> >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array<double, -1, 1>::PrivateType]’
nbinomGLM.cpp:32:32: required from here
/home/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/Memory.h:470:10: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return first_aligned<unpacket_traits<DefaultPacketType>::alignment>(array, size);
^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o apeglm.so RcppExports.o nbinomGLM.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-apeglm/00new/apeglm/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (apeglm)
