Package: SeqSQC

Version: 1.5.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SeqSQC_1.5.0.tar.gz && rm -rf SeqSQC.buildbin-libdir && mkdir SeqSQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SeqSQC.buildbin-libdir SeqSQC_1.5.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SeqSQC_1.5.0.zip && rm SeqSQC_1.5.0.tar.gz SeqSQC_1.5.0.zip

StartedAt: 2019-04-08 19:42:12 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 19:43:36 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 84.7 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SeqSQC_1.5.0.tar.gz && rm -rf SeqSQC.buildbin-libdir && mkdir SeqSQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SeqSQC.buildbin-libdir SeqSQC_1.5.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SeqSQC_1.5.0.zip && rm SeqSQC_1.5.0.tar.gz SeqSQC_1.5.0.zip
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install for i386

* installing *source* package 'SeqSQC' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SeqSQC'
    finding HTML links ... done
    CCDS.Hs37.3.reduced_chr1.bed            html  
    IBDCheck                                html  
    IBDRemove                               html  
    Inbreeding                              html  
    LoadVfile                               html  
    MissingRate                             html  
    PCACheck                                html  
    RenderReport                            html  
    SeqOpen                                 html  
    SeqSQC-class                            html  
    SeqSQC-package                          html  
    SexCheck                                html  
    example.gds                             html  
    example.seqfile.Rdata                   html  
    example_sub.vcf                         html  
    plotQC                                  html  
    problemList                             html  
    sampleAnnotation.txt                    html  
    sampleQC                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SeqSQC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SeqSQC' as SeqSQC_1.5.0.zip
* DONE (SeqSQC)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'SeqSQC' successfully unpacked and MD5 sums checked