Package: BadRegionFinder

Version: 1.11.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/BadRegionFinder_1.11.0.tar.gz && rm -rf BadRegionFinder.buildbin-libdir && mkdir BadRegionFinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BadRegionFinder.buildbin-libdir BadRegionFinder_1.11.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL BadRegionFinder_1.11.0.zip && rm BadRegionFinder_1.11.0.tar.gz BadRegionFinder_1.11.0.zip

StartedAt: 2019-04-08 20:12:31 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 20:13:33 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 61.3 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/BadRegionFinder_1.11.0.tar.gz && rm -rf BadRegionFinder.buildbin-libdir && mkdir BadRegionFinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BadRegionFinder.buildbin-libdir BadRegionFinder_1.11.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL BadRegionFinder_1.11.0.zip && rm BadRegionFinder_1.11.0.tar.gz BadRegionFinder_1.11.0.zip
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install for i386

* installing *source* package 'BadRegionFinder' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BadRegionFinder'
    finding HTML links ... done
    BadRegionFinder-package                 html  
    determineCoverage                       html  
    determineCoverageQuality                html  
    determineQuantiles                      html  
    determineRegionsOfInterest              html  
    plotDetailed                            html  
    plotSummary                             html  
    plotSummaryGenes                        html  
    reportBadRegionsDetailed                html  
    reportBadRegionsGenes                   html  
    reportBadRegionsSummary                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BadRegionFinder' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BadRegionFinder' as BadRegionFinder_1.11.0.zip
* DONE (BadRegionFinder)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'BadRegionFinder' successfully unpacked and MD5 sums checked