Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 11:40:47 -0400 (Tue, 09 Apr 2019).
Package 49/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
AnalysisPageServer 1.17.0 Brad Friedman
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | [ OK ] | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: AnalysisPageServer |
Version: 1.17.0 |
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL AnalysisPageServer |
StartedAt: 2019-04-08 17:59:19 -0400 (Mon, 08 Apr 2019) |
EndedAt: 2019-04-08 17:59:34 -0400 (Mon, 08 Apr 2019) |
EllapsedTime: 15.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL AnalysisPageServer ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’ * installing *source* package ‘AnalysisPageServer’ ... ** using staged installation ** libs g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c AnalysisPageSVG.cpp -o AnalysisPageSVG.o AnalysisPageSVG.cpp: In function ‘int matchPlotPoints(XMLElementList, std::deque<double>, std::deque<double>, double, int, int)’: AnalysisPageSVG.cpp:154:8: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(n != y.size()) throw "x and y have different lengths"; ˜˜^˜˜˜˜˜˜˜˜˜˜ AnalysisPageSVG.cpp:157:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(els.size() < start + n) { ˜˜˜˜˜˜˜˜˜˜˜^˜˜˜˜˜˜˜˜˜˜ AnalysisPageSVG.cpp:194:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(int i = 0; i < x.size(); i++) { ˜˜^˜˜˜˜˜˜˜˜˜ AnalysisPageSVG.cpp:210:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(int i = 0; i < els_x.size(); i++) { ˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜ AnalysisPageSVG.cpp:215:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(int i = 0; i < els_y.size(); i++) { ˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜ g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c R_init_AnalysisPageServer.cpp -o R_init_AnalysisPageServer.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c SearchReplace2.cpp -o SearchReplace2.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c catch.c -o catch.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c cor.cpp -o cor.o cor.cpp: In function ‘double basic_cor(const std::deque<double>&, const std::deque<double>&)’: cor.cpp:24:8: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(n != y.size()) throw "different sizes"; ˜˜^˜˜˜˜˜˜˜˜˜˜ g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c tinyxml2.cpp -o tinyxml2.o g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o AnalysisPageServer.so AnalysisPageSVG.o R_init_AnalysisPageServer.o SearchReplace2.o catch.o cor.o tinyxml2.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-AnalysisPageServer/00new/AnalysisPageServer/libs ** R ** inst ** byte-compile and prepare package for lazy loading While loading AnalysisPageServer: urlEncode not found, providing a pure R implementation While loading AnalysisPageServer: urlDecode not found, providing a pure R implementation ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AnalysisPageServer)