pRolocdata 1.11.8
Laurent Gatto
| Snapshot Date: 2016-09-21 09:20:16 -0700 (Wed, 21 Sep 2016) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/pRolocdata | | Last Changed Rev: 3886 / Revision: 3889 | | Last Changed Date: 2016-09-13 02:13:01 -0700 (Tue, 13 Sep 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | OK | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | OK | OK | OK | [ OK ] | |
##############################################################################
##############################################################################
###
### Running command:
###
### cd pRolocdata.buildbin-libdir/pRolocdata && zip -r ../../pRolocdata_1.11.8.zip . & cd ../..
###
##############################################################################
##############################################################################
Scanning files .
adding: data/ (208 bytes security) (stored 0%)
adding: data/andreyev2010.rda (188 bytes security) (deflated 0%)
adding: data/andreyev2010activ.rda (188 bytes security) (deflated 0%)
adding: data/andreyev2010rest.rda (188 bytes security) (deflated 0%)
adding: data/andy2011.RData (188 bytes security) (deflated 1%)
adding: data/andy2011goCC.rda (188 bytes security) (deflated 0%)
adding: data/andy2011goCC.RData (188 bytes security) (deflated 6%)
adding: data/andy2011hpa.rda (188 bytes security) (deflated 0%)
adding: data/at_chloro.rda (188 bytes security) (deflated 0%)
adding: data/datalist (188 bytes security) (deflated 60%)
adding: data/dunkley2006.RData (188 bytes security) (deflated 0%)
adding: data/dunkley2006goCC.RData (188 bytes security) (deflated 10%)
adding: data/E14TG2aR.RData (188 bytes security) (deflated 0%)
adding: data/E14TG2aS1.RData (188 bytes security) (deflated 0%)
adding: data/E14TG2aS1goCC.rda (188 bytes security) (deflated 3%)
adding: data/E14TG2aS1yLoc.rda (188 bytes security) (deflated 0%)
adding: data/E14TG2aS2.RData (188 bytes security) (deflated 0%)
adding: data/fabre2015r1.rda (188 bytes security) (deflated 1%)
adding: data/fabre2015r2.rda (188 bytes security) (deflated 1%)
adding: data/foster2006.RData (188 bytes security) (deflated 0%)
adding: data/groen2014cmb.RData (188 bytes security) (deflated 0%)
adding: data/groen2014r1.RData (188 bytes security) (deflated 0%)
adding: data/groen2014r1goCC.RData (188 bytes security) (deflated 2%)
adding: data/groen2014r2.RData (188 bytes security) (deflated 0%)
adding: data/groen2014r3.RData (188 bytes security) (deflated 0%)
adding: data/hall2009.rda (188 bytes security) (deflated 0%)
adding: data/havugimana2012.rda (188 bytes security) (deflated 4%)
adding: data/hyperLOPIT2015.RData (188 bytes security) (deflated 0%)
adding: data/hyperLOPIT2015goCC.RData (188 bytes security) (deflated 7%)
adding: data/hyperLOPIT2015ms2.RData (188 bytes security) (deflated 0%)
adding: data/hyperLOPIT2015ms3r1.RData (188 bytes security) (deflated 0%)
adding: data/hyperLOPIT2015ms3r2.RData (188 bytes security) (deflated 0%)
adding: data/hyperLOPIT2015ms3r3.RData (188 bytes security) (deflated 0%)
adding: data/itzhak2016stcSILAC.rda (188 bytes security) (deflated 0%)
adding: data/kirkwood2013.rda (188 bytes security) (deflated 2%)
adding: data/kristensen2012r1.rda (188 bytes security) (deflated 0%)
adding: data/kristensen2012r2.rda (188 bytes security) (deflated 0%)
adding: data/kristensen2012r3.rda (188 bytes security) (deflated 0%)
adding: data/mulvey2015.rda (188 bytes security) (deflated 0%)
adding: data/mulvey2015norm.rda (188 bytes security) (deflated 0%)
adding: data/nikolovski2012.RData (188 bytes security) (deflated 0%)
adding: data/nikolovski2012imp.RData (188 bytes security) (deflated 0%)
adding: data/nikolovski2014.rda (188 bytes security) (deflated 0%)
adding: data/rodriguez2012r1.rda (188 bytes security) (deflated 0%)
adding: data/rodriguez2012r2.rda (188 bytes security) (deflated 0%)
adding: data/rodriguez2012r3.rda (188 bytes security) (deflated 0%)
adding: data/stekhoven2014.rda (188 bytes security) (deflated 0%)
adding: data/tan2009r1.RData (188 bytes security) (deflated 0%)
adding: data/tan2009r1goCC.RData (188 bytes security) (deflated 4%)
adding: data/tan2009r2.RData (188 bytes security) (deflated 0%)
adding: data/tan2009r3.RData (188 bytes security) (stored 0%)
adding: data/trotter2010.rda (188 bytes security) (stored 0%)
adding: data/trotter2010shallow.rda (188 bytes security) (stored 0%)
adding: data/trotter2010steep.rda (188 bytes security) (stored 0%)
adding: DESCRIPTION (188 bytes security) (deflated 48%)
adding: extdata/ (208 bytes security) (stored 0%)
adding: extdata/22863883_Rep1.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/22863883_Rep2.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/22863883_Rep3.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/22939629.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/24043423.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/245589ST2_protein_distributions.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/245589ST3_MarkerList_250614.csv.gz (188 bytes security) (stored 0%)
adding: extdata/245589ST4_SVMLocalisation_280514.csv.gz (188 bytes security) (stored 0%)
adding: extdata/25561571_Rep1.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/25561571_Rep2.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/Andreyev2009_Supplemental_Table_S1-L-C.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/Andreyev2009_Supplemental_Table_S2-L-C-EAD.csv.gz (188 bytes security) (stored 0%)
adding: extdata/andy2011_Experimental_Info.txt (188 bytes security) (deflated 48%)
adding: extdata/andy2011_ispy_results_proteins_stringent.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/AT_CHLORO_table_120906.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/boostingMarkers.pdf (188 bytes security) (deflated 1%)
adding: extdata/boostingMarkers.Rmd (188 bytes security) (deflated 80%)
adding: extdata/bpw-gocc.rds (188 bytes security) (deflated 8%)
adding: extdata/bpw-pdres.rds (188 bytes security) (stored 0%)
adding: extdata/bpw-svmopt.rds (188 bytes security) (deflated 3%)
adding: extdata/bpw-tlopt.rds (188 bytes security) (deflated 79%)
adding: extdata/breckels2015.rda (188 bytes security) (deflated 0%)
adding: extdata/Dunkley2006.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/E14TG2a_2011.tar.gz (188 bytes security) (deflated 0%)
adding: extdata/exprsFile.csv.gz (188 bytes security) (stored 0%)
adding: extdata/fdataFile.csv.gz (188 bytes security) (stored 0%)
adding: extdata/Groen_MarkerList.csv (188 bytes security) (deflated 80%)
adding: extdata/Groen_Supplemental_Table2.csv (188 bytes security) (deflated 75%)
adding: extdata/Groen_Supplemental_Table3a.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/Groen_Supplemental_Table3b.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/Groen_Supplemental_Table3c.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/Hall2009_Table_S1.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/Hall2009_Table_S4.csv.gz (188 bytes security) (stored 0%)
adding: extdata/Hall2009_Table_S5.csv.gz (188 bytes security) (stored 0%)
adding: extdata/human-tl.rda (188 bytes security) (stored 0%)
adding: extdata/hyperLOPIT-SIData-fraction-info.csv (188 bytes security) (deflated 55%)
adding: extdata/hyperLOPIT-SIData-info.csv.gz (188 bytes security) (stored 0%)
adding: extdata/hyperLOPIT-SIData-ms2-rep1.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/hyperLOPIT-SIData-ms3-rep1.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/hyperLOPIT-SIData-ms3-rep12-intersect.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/hyperLOPIT-SIData-ms3-rep2.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/hyperLOPIT-SIData-ms3-rep3.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/markersDunkley.rda (188 bytes security) (stored 0%)
adding: extdata/markersE14.rda (188 bytes security) (stored 0%)
adding: extdata/markersHuman.rda (188 bytes security) (stored 0%)
adding: extdata/markersTan.rda (188 bytes security) (stored 0%)
adding: extdata/mmc3.csv (188 bytes security) (deflated 76%)
adding: extdata/Nikolovski2012_SupplTable1.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/Nikolovski2012_SupplTable2.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/Nikolovski2012_SupplTable3.csv.gz (188 bytes security) (stored 0%)
adding: extdata/pdataFile.csv.gz (188 bytes security) (stored 0%)
adding: extdata/PIIS0092867406003692.mmc2.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/PIIS0092867406003692.mmc3.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/PIIS0092867406003692.mmc4-highDensity.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/PIIS0092867406003692.mmc4-lowDensity.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/PIIS0092867406003692.mmc5-highDensity.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/PIIS0092867406003692.mmc5-lowDensity.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/PIIS0092867406003692.mmc6-localizations.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/PIIS0092867406003692.mmc6-refinedLoc.csv.gz (188 bytes security) (deflated 0%)
adding: extdata/pmic_201000359_sm_Shallow.csv.gz (188 bytes security) (stored 0%)
adding: extdata/pmic_201000359_sm_Steep.csv.gz (188 bytes security) (stored 0%)
adding: extdata/pr2010988_si_003.xls (188 bytes security) (deflated 60%)
adding: extdata/pr800866n_si_004-rep1.csv.gz (188 bytes security) (stored 0%)
adding: extdata/pr800866n_si_004-rep2.csv.gz (188 bytes security) (stored 0%)
adding: extdata/pr800866n_si_004-rep3.csv.gz (188 bytes security) (stored 0%)
adding: extdata/pr800866n_si_007.csv.gz (188 bytes security) (stored 0%)
adding: extdata/protein-complex-markers.rda (188 bytes security) (stored 0%)
adding: extdata/Protein_list.txt (188 bytes security) (deflated 71%)
adding: extdata/README (188 bytes security) (deflated 61%)
adding: extdata/tabdelimited._gHentss2F9k.txt.gz (188 bytes security) (deflated 0%)
adding: extdata/TanFlyMineFiltered.csv.gz (188 bytes security) (stored 0%)
adding: extdata/TanFlyMineUnfiltered.csv.gz (188 bytes security) (deflated 2%)
adding: extdata/tl-res/ (208 bytes security) (stored 0%)
adding: extdata/tl-res/dunkley-tl.rda (188 bytes security) (stored 0%)
adding: extdata/tl-res/groen-tl.rda (188 bytes security) (stored 0%)
adding: extdata/tl-res/hpa-tl.rda (188 bytes security) (stored 0%)
adding: extdata/tl-res/human-tl.rda (188 bytes security) (stored 0%)
adding: extdata/tl-res/mouse-tl.rda (188 bytes security) (stored 0%)
adding: extdata/tl-res/tan-tl.rda (188 bytes security) (stored 0%)
adding: extdata/tl-res/yloc-tl.rda (188 bytes security) (stored 0%)
adding: extdata/yloc_mouse_seqId_selected_features.csv (188 bytes security) (deflated 64%)
adding: help/ (208 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 75%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: help/pRolocdata.rdb (188 bytes security) (deflated 1%)
adding: help/pRolocdata.rdx (188 bytes security) (stored 0%)
adding: html/ (208 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 86%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 65%)
adding: MD5 (188 bytes security) (deflated 54%)
adding: Meta/ (208 bytes security) (stored 0%)
adding: Meta/data.rds (188 bytes security) (stored 0%)
adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
adding: Meta/links.rds (188 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 36%)
adding: NEWS (188 bytes security) (deflated 70%)
adding: R/ (208 bytes security) (stored 0%)
adding: R/pRolocdata (188 bytes security) (deflated 41%)
adding: R/pRolocdata.rdb (188 bytes security) (deflated 5%)
adding: R/pRolocdata.rdx (188 bytes security) (stored 0%)
adding: scripts/ (208 bytes security) (stored 0%)
adding: scripts/addTanIds.R (188 bytes security) (deflated 70%)
adding: scripts/andreyev2010.R (188 bytes security) (deflated 65%)
adding: scripts/andy2011.R (188 bytes security) (deflated 62%)
adding: scripts/at_chloro.R (188 bytes security) (deflated 64%)
adding: scripts/dunkley2006.R (188 bytes security) (deflated 63%)
adding: scripts/E14TG2a.R (188 bytes security) (deflated 69%)
adding: scripts/fabre2015.R (188 bytes security) (deflated 56%)
adding: scripts/foster2006.R (188 bytes security) (deflated 66%)
adding: scripts/groen2014.R (188 bytes security) (deflated 65%)
adding: scripts/hall2009.R (188 bytes security) (deflated 58%)
adding: scripts/havugimana2012.R (188 bytes security) (deflated 70%)
adding: scripts/hyperlopit2015.R (188 bytes security) (deflated 70%)
adding: scripts/itzhak2016.R (188 bytes security) (deflated 54%)
adding: scripts/kirkwood2013.R (188 bytes security) (deflated 56%)
adding: scripts/kristensen2012.R (188 bytes security) (deflated 68%)
adding: scripts/nikolovski2012.R (188 bytes security) (deflated 61%)
adding: scripts/nikolovski2014.R (188 bytes security) (deflated 70%)
adding: scripts/protein-complex-markers.R (188 bytes security) (deflated 44%)
adding: scripts/rodriguez-pineiro2012.R (188 bytes security) (deflated 73%)
adding: scripts/runnall.sh (188 bytes security) (stored 0%)
adding: scripts/Stekhoven2014.R (188 bytes security) (deflated 44%)
adding: scripts/tan2009.R (188 bytes security) (deflated 72%)
adding: scripts/trotter2010.R (188 bytes security) (deflated 70%)
adding: scripts/ylocMouse.R (188 bytes security) (deflated 58%)