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BioC 3.4: BUILD report for RMassBank on morelia

This page was generated on 2016-09-21 03:51:51 -0700 (Wed, 21 Sep 2016).

Package 1028/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RMassBank 2.1.0
RMassBank at Eawag
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/RMassBank
Last Changed Rev: 117081 / Revision: 121152
Last Changed Date: 2016-05-03 14:30:44 -0700 (Tue, 03 May 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  NotNeeded  ERROR  skipped 
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  ERROR  skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: RMassBank
Version: 2.1.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RMassBank
StartedAt: 2016-09-19 22:53:54 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 22:54:04 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 9.5 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RMassBank
###
##############################################################################
##############################################################################


* checking for file ‘RMassBank/DESCRIPTION’ ... OK
* preparing ‘RMassBank’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘RMassBank’ ...
** R
** inst
** preparing package for lazy loading
Error : .onLoad failed in loadNamespace() for 'rcdk', details:
  call: fun(libname, pkgname)
  error: 
=================
=================
This version of rCDK uses a CDK library that requires Java 1.8 or greater.

Please install Java 1.8 and let R know which Java to use by running the config tool:

sudo R CMD javareconf

Then you will need to re-install rJava.

# re install fromfrom R
# install.packages('rJava', type='source')

=================
=================
         
ERROR: lazy loading failed for package ‘RMassBank’
* removing ‘/private/tmp/Rtmp9dIFyF/Rinst13af42071488e/RMassBank’
      -----------------------------------
ERROR: package installation failed