Back to Workflows build report for BioC 3.20 |
This page was generated on 2024-08-20 16:30 -0400 (Tue, 20 Aug 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4703 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4440 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4472 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 1/30 | Hostname | OS / Arch | INSTALL | BUILD | ||||||||
annotation 1.29.0 (landing page) Bioconductor Package Maintainer
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | ![]() | |||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | |||||||||
To the developers/maintainers of the annotation package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: annotation |
Version: 1.29.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data annotation |
StartedAt: 2024-08-20 13:11:33 -0400 (Tue, 20 Aug 2024) |
EndedAt: 2024-08-20 13:15:14 -0400 (Tue, 20 Aug 2024) |
EllapsedTime: 220.8 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data annotation ### ############################################################################## ############################################################################## * checking for file ‘annotation/DESCRIPTION’ ... OK * preparing ‘annotation’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Annotating_Genomic_Ranges.Rmd’ using rmarkdown Quitting from lines 65-66 [unnamed-chunk-3] (Annotating_Genomic_Ranges.Rmd) Error: processing vignette 'Annotating_Genomic_Ranges.Rmd' failed with diagnostics: failed to connect reason: Timeout was reached: [bioconductor.org] Resolving timed out after 10009 milliseconds Consider rerunning with 'localHub=TRUE' --- failed re-building ‘Annotating_Genomic_Ranges.Rmd’ --- re-building ‘Annotation_Resources.Rmd’ using rmarkdown Quitting from lines 190-192 [unnamed-chunk-3] (Annotation_Resources.Rmd) Error: processing vignette 'Annotation_Resources.Rmd' failed with diagnostics: failed to connect reason: Timeout was reached: [bioconductor.org] Resolving timed out after 10073 milliseconds Consider rerunning with 'localHub=TRUE' --- failed re-building ‘Annotation_Resources.Rmd’ SUMMARY: processing the following files failed: ‘Annotating_Genomic_Ranges.Rmd’ ‘Annotation_Resources.Rmd’ Error: Vignette re-building failed. Execution halted