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This page was generated on 2024-09-25 22:55 -0400 (Wed, 25 Sep 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 346
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 26/47HostnameOS / ArchINSTALLBUILDCHECK
GenomicState 0.99.15  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2024-09-25 20:25 -0400 (Wed, 25 Sep 2024)
git_url: https://git.bioconductor.org/packages/GenomicState
git_branch: devel
git_last_commit: e13845a
git_last_commit_date: 2023-05-07 02:24:37 -0400 (Sun, 07 May 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  ERROR    ERROR  skipped


BUILD results for GenomicState on nebbiolo2

To the developers/maintainers of the GenomicState package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GenomicState
Version: 0.99.15
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicState
StartedAt: 2024-09-25 20:57:43 -0400 (Wed, 25 Sep 2024)
EndedAt: 2024-09-25 20:57:44 -0400 (Wed, 25 Sep 2024)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicState
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* checking for file ‘GenomicState/DESCRIPTION’ ... OK
* preparing ‘GenomicState’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘bumphunter’, ‘derfinder’, ‘org.Hs.eg.db’ are not available for package ‘GenomicState’
* removing ‘/tmp/RtmpnZL7AE/Rinst822e59f4402c/GenomicState’
      -----------------------------------
ERROR: package installation failed