Multiple platform build/check report for BioC 3.20 - BUILD results for scDblFinder on kunpeng2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4643
palomino6	Windows Server 2022 Datacenter	x64	4.4.1 (2024-06-14 ucrt) -- "Race for Your Life"	4414
lconway	macOS 12.7.1 Monterey	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4442
kjohnson3	macOS 13.6.5 Ventura	arm64	4.4.1 (2024-06-14) -- "Race for Your Life"	4391
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	4.4.1 (2024-06-14) -- "Race for Your Life"	3833
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for scDblFinder on kunpeng2

To the developers/maintainers of the scDblFinder package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scDblFinder.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: scDblFinder

Version: 1.19.1

Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data scDblFinder

StartedAt: 2024-07-06 01:36:25 -0000 (Sat, 06 Jul 2024)

EndedAt: 2024-07-06 01:39:30 -0000 (Sat, 06 Jul 2024)

EllapsedTime: 185.2 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data scDblFinder
###
##############################################################################
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* checking for file ‘scDblFinder/DESCRIPTION’ ... OK
* preparing ‘scDblFinder’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘computeDoubletDensity.Rmd’ using rmarkdown

Quitting from lines 27-32 [unnamed-chunk-2] (computeDoubletDensity.Rmd)
Error: processing vignette 'computeDoubletDensity.Rmd' failed with diagnostics:
failed to load resource
  name: AH73905
  title: Ensembl 97 EnsDb for Mus musculus
  reason: 1 resources failed to download
--- failed re-building ‘computeDoubletDensity.Rmd’

--- re-building ‘findDoubletClusters.Rmd’ using rmarkdown

Quitting from lines 27-32 [unnamed-chunk-2] (findDoubletClusters.Rmd)
Error: processing vignette 'findDoubletClusters.Rmd' failed with diagnostics:
failed to load resource
  name: AH73905
  title: Ensembl 97 EnsDb for Mus musculus
  reason: file is not a database
--- failed re-building ‘findDoubletClusters.Rmd’

--- re-building ‘introduction.Rmd’ using rmarkdown
--- finished re-building ‘introduction.Rmd’

--- re-building ‘recoverDoublets.Rmd’ using rmarkdown
Warning: call dbDisconnect() when finished working with a connection
--- finished re-building ‘recoverDoublets.Rmd’

--- re-building ‘scATAC.Rmd’ using rmarkdown
--- finished re-building ‘scATAC.Rmd’

--- re-building ‘scDblFinder.Rmd’ using rmarkdown
--- finished re-building ‘scDblFinder.Rmd’

SUMMARY: processing the following files failed:
  ‘computeDoubletDensity.Rmd’ ‘findDoubletClusters.Rmd’

Error: Vignette re-building failed.
Execution halted