Back to Multiple platform build/check report for BioC 3.20:   simplified   long
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2024-10-03 11:42 -0400 (Thu, 03 Oct 2024).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4461
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4716
palomino8Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4466
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4498
kjohnson3macOS 13.6.5 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4446
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.1 (2024-06-14) -- "Race for Your Life" 4445
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1711/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rexposome 1.27.0  (landing page)
Xavier Escribà Montagut
Snapshot Date: 2024-10-02 13:40 -0400 (Wed, 02 Oct 2024)
git_url: https://git.bioconductor.org/packages/rexposome
git_branch: devel
git_last_commit: 03f5c48
git_last_commit_date: 2024-04-30 10:59:30 -0400 (Tue, 30 Apr 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    WARNINGS  


BUILD results for rexposome on nebbiolo2

To the developers/maintainers of the rexposome package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rexposome.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: rexposome
Version: 1.27.0
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 rexposome
StartedAt: 2024-10-02 18:49:38 -0400 (Wed, 02 Oct 2024)
EndedAt: 2024-10-02 18:51:05 -0400 (Wed, 02 Oct 2024)
EllapsedTime: 87.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 rexposome
###
##############################################################################
##############################################################################


* checking for file ‘rexposome/DESCRIPTION’ ... OK
* preparing ‘rexposome’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘exposome_data_analysis.Rmd’ using rmarkdown
pandoc: /tmp/RtmpEbofd2/Rbuild1573937903ace/rexposome/vignettes/exposome_data_analysis.html: hClose: resource exhausted (No space left on device)
Error: processing vignette 'exposome_data_analysis.Rmd' failed with diagnostics:
pandoc document conversion failed with error 1
--- failed re-building ‘exposome_data_analysis.Rmd’

--- re-building ‘mutiple_imputation_data_analysis.Rmd’ using rmarkdown
--- finished re-building ‘mutiple_imputation_data_analysis.Rmd’

SUMMARY: processing the following file failed:
  ‘exposome_data_analysis.Rmd’

Error: Vignette re-building failed.
Execution halted