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This page was generated on 2024-06-11 15:41 -0400 (Tue, 11 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" 4679
palomino4Windows Server 2022 Datacenterx644.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" 4414
merida1macOS 12.7.4 Montereyx86_644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4441
kjohnson1macOS 13.6.6 Venturaarm644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4394
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 219/2239HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biscuiteer 1.19.0  (landing page)
Jacob Morrison
Snapshot Date: 2024-06-09 14:00 -0400 (Sun, 09 Jun 2024)
git_url: https://git.bioconductor.org/packages/biscuiteer
git_branch: devel
git_last_commit: acd4f5d
git_last_commit_date: 2024-04-30 11:18:36 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    TIMEOUT  skippedskipped


BUILD BIN results for biscuiteer on merida1

To the developers/maintainers of the biscuiteer package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biscuiteer.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: biscuiteer
Version: 1.19.0
Command: rm -rf biscuiteer.buildbin-libdir && mkdir biscuiteer.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh biscuiteer_1.19.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R biscuiteer.buildbin-libdir
StartedAt: 2024-06-10 12:12:25 -0400 (Mon, 10 Jun 2024)
EndedAt: 2024-06-10 12:14:58 -0400 (Mon, 10 Jun 2024)
EllapsedTime: 153.5 seconds
RetCode: 0
Status:   OK  
PackageFile: biscuiteer_1.19.0.tgz
PackageFileSize: 5.19 MiB

Command output

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###
### Running command:
###
###   rm -rf biscuiteer.buildbin-libdir && mkdir biscuiteer.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh biscuiteer_1.19.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R biscuiteer.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=biscuiteer.buildbin-libdir biscuiteer_1.19.0.tar.gz'
>>>>>>> 

* installing *source* package ‘biscuiteer’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘BiocParallel::bpstart’ by ‘QDNAseq::bpstart’ when loading ‘biscuiteer’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘BiocParallel::bpstart’ by ‘QDNAseq::bpstart’ when loading ‘biscuiteer’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘BiocParallel::bpstart’ by ‘QDNAseq::bpstart’ when loading ‘biscuiteer’
** testing if installed package keeps a record of temporary installation path
* DONE (biscuiteer)