Multiple platform build/check report for BioC 3.20 - BUILD results for Statial on palomino4

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup"	4679
palomino4	Windows Server 2022 Datacenter	x64	4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup"	4414
merida1	macOS 12.7.4 Monterey	x86_64	4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"	4441
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"	4394
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for Statial on palomino4

To the developers/maintainers of the Statial package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Statial.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: Statial

Version: 1.7.0

Command: chmod a+r Statial -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Statial

StartedAt: 2024-06-09 22:41:31 -0400 (Sun, 09 Jun 2024)

EndedAt: 2024-06-09 22:42:48 -0400 (Sun, 09 Jun 2024)

EllapsedTime: 77.5 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
###
###   chmod a+r Statial -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Statial
###
##############################################################################
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* checking for file 'Statial/DESCRIPTION' ... OK
* preparing 'Statial':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'Statial.Rmd' using rmarkdown

Quitting from lines 50-64 [unnamed-chunk-3] (Statial.Rmd)
Error: processing vignette 'Statial.Rmd' failed with diagnostics:
package or namespace load failed for 'lisaClust':
 object 'cellAnnotation<-' is not exported by 'namespace:spicyR'
--- failed re-building 'Statial.Rmd'

SUMMARY: processing the following file failed:
  'Statial.Rmd'

Error: Vignette re-building failed.
Execution halted