| Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-10-31 12:12 -0400 (Thu, 31 Oct 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4503 |
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4763 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4506 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4537 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2004/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SOMNiBUS 1.14.0 (landing page) Kathleen Klein
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | ERROR | ERROR | skipped | ||||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | ERROR | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | ERROR | ERROR | skipped | ||||||||||
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To the developers/maintainers of the SOMNiBUS package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SOMNiBUS.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: SOMNiBUS |
| Version: 1.14.0 |
| Command: chmod a+r SOMNiBUS -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SOMNiBUS |
| StartedAt: 2024-10-30 22:49:35 -0400 (Wed, 30 Oct 2024) |
| EndedAt: 2024-10-30 22:49:54 -0400 (Wed, 30 Oct 2024) |
| EllapsedTime: 19.5 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r SOMNiBUS -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SOMNiBUS
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* checking for file 'SOMNiBUS/DESCRIPTION' ... OK
* preparing 'SOMNiBUS':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
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* installing *source* package 'SOMNiBUS' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: object 'read.bsmooth' is not exported by 'namespace:bsseq'
Execution halted
ERROR: lazy loading failed for package 'SOMNiBUS'
* removing 'F:/biocbuild/bbs-3.20-bioc/tmpdir/RtmpIz8yMc/Rinst3e40424e414d/SOMNiBUS'
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ERROR: package installation failed