Zuguang Gu
| Snapshot Date: 2024-09-11 14:00 -0400 (Wed, 11 Sep 2024) |
| git_url: https://git.bioconductor.org/packages/HilbertCurve |
| git_branch: devel |
| git_last_commit: e0f326a |
| git_last_commit_date: 2024-09-10 07:31:18 -0400 (Tue, 10 Sep 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-09-12 11:50 -0400 (Thu, 12 Sep 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4713 |
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4444 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4450 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4483 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4430 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4428 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 954/2258 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HilbertCurve 1.99.0 (landing page) Zuguang Gu
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | ERROR | OK | ERROR | |||||||||
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | ERROR | OK | ERROR | ||||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | ERROR | OK | ERROR | OK | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | ERROR | OK | ERROR | OK | |||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | ERROR | OK | ERROR | ||||||||||
|
To the developers/maintainers of the HilbertCurve package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HilbertCurve.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: HilbertCurve |
| Version: 1.99.0 |
| Command: /home/biocbuild/R/R/bin/R CMD check --install=check:HilbertCurve.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings HilbertCurve_1.99.0.tar.gz |
| StartedAt: 2024-09-12 05:55:31 -0000 (Thu, 12 Sep 2024) |
| EndedAt: 2024-09-12 05:55:35 -0000 (Thu, 12 Sep 2024) |
| EllapsedTime: 4.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: HilbertCurve.Rcheck |
| Warnings: NA |
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###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD check --install=check:HilbertCurve.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings HilbertCurve_1.99.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/HilbertCurve.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14)
GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘HilbertCurve/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘HilbertCurve’ version ‘1.99.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘HilbertCurve’ can be installed ... ERROR
Installation failed.
See ‘/home/biocbuild/bbs-3.20-bioc/meat/HilbertCurve.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR
See
‘/home/biocbuild/bbs-3.20-bioc/meat/HilbertCurve.Rcheck/00check.log’
for details.
HilbertCurve.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL HilbertCurve ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’ * installing *source* package ‘HilbertCurve’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 10.3.1’ make: Nothing to be done for 'all'. installing to /home/biocbuild/R/R-4.4.1/site-library/00LOCK-HilbertCurve/00new/HilbertCurve/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for ‘HilbertCurve’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/home/biocbuild/R/R-4.4.1/site-library/00LOCK-HilbertCurve/00new/HilbertCurve/libs/HilbertCurve.so': /home/biocbuild/R/R-4.4.1/site-library/00LOCK-HilbertCurve/00new/HilbertCurve/libs/HilbertCurve.so: invalid ELF header Error: loading failed Execution halted ERROR: loading failed * removing ‘/home/biocbuild/R/R-4.4.1/site-library/HilbertCurve’ * restoring previous ‘/home/biocbuild/R/R-4.4.1/site-library/HilbertCurve’