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This page was generated on 2024-06-11 15:40 -0400 (Tue, 11 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" 4679
palomino4Windows Server 2022 Datacenterx644.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" 4414
merida1macOS 12.7.4 Montereyx86_644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4441
kjohnson1macOS 13.6.6 Venturaarm644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4394
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 352/2239HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ClassifyR 3.9.2  (landing page)
Dario Strbenac
Snapshot Date: 2024-06-09 14:00 -0400 (Sun, 09 Jun 2024)
git_url: https://git.bioconductor.org/packages/ClassifyR
git_branch: devel
git_last_commit: c8738f1
git_last_commit_date: 2024-06-09 09:00:05 -0400 (Sun, 09 Jun 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  YES
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  YES
merida1macOS 12.7.4 Monterey / x86_64  OK    OK    TIMEOUT    OK  
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  YES


BUILD BIN results for ClassifyR on palomino4

To the developers/maintainers of the ClassifyR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ClassifyR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: ClassifyR
Version: 3.9.2
Command: rm -rf ClassifyR.buildbin-libdir && mkdir ClassifyR.buildbin-libdir && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL --build --library=ClassifyR.buildbin-libdir ClassifyR_3.9.2.tar.gz
StartedAt: 2024-06-10 13:11:03 -0400 (Mon, 10 Jun 2024)
EndedAt: 2024-06-10 13:13:11 -0400 (Mon, 10 Jun 2024)
EllapsedTime: 128.4 seconds
RetCode: 0
Status:   OK  
PackageFile: ClassifyR_3.9.2.zip
PackageFileSize: 2.158 MiB

Command output

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###
### Running command:
###
###   rm -rf ClassifyR.buildbin-libdir && mkdir ClassifyR.buildbin-libdir && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL --build --library=ClassifyR.buildbin-libdir ClassifyR_3.9.2.tar.gz
###
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* installing *source* package 'ClassifyR' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
using C++11
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG     -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c coxformatrices.cpp -o coxformatrices.o
coxformatrices.cpp: In function 'void coxmat(double*, int*, int*, double*, double*, double*, int*, int*, int*, double*, int*, double*, double*, int*, double*, double*, double*, double*, double*, int*, double*, double*, double*, double*, double*, double*)':
coxformatrices.cpp:23:16: warning: unused variable 'sclback2' [-Wunused-variable]
   23 |         double sclback2=*sctest2;
      |                ^~~~~~~~
coxformatrices.cpp:24:16: warning: unused variable 'sclback3' [-Wunused-variable]
   24 |         double sclback3=*sctest3;
      |                ^~~~~~~~
g++ -shared -s -static-libgcc -o ClassifyR.dll tmp.def coxformatrices.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.20-bioc/meat/ClassifyR.buildbin-libdir/00LOCK-ClassifyR/00new/ClassifyR/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'ROCplot' with signature '"ClassifyResult"': no definition for class "ClassifyResult"
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ClassifyR' as ClassifyR_3.9.2.zip
* DONE (ClassifyR)