Back to Multiple platform build/check report for BioC 3.20:   simplified   long
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2024-07-18 11:39 -0400 (Thu, 18 Jul 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4683
palomino8Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4379
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4450
kjohnson3macOS 13.6.5 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4399
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 86/2248HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnVILWorkflow 1.5.0  (landing page)
Sehyun Oh
Snapshot Date: 2024-07-17 14:00 -0400 (Wed, 17 Jul 2024)
git_url: https://git.bioconductor.org/packages/AnVILWorkflow
git_branch: devel
git_last_commit: b17b629
git_last_commit_date: 2024-04-30 11:47:14 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  ERROR    ERROR  skipped
palomino8Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson3macOS 13.6.5 Ventura / arm64  ERROR    ERROR  skippedskipped


BUILD results for AnVILWorkflow on palomino8

To the developers/maintainers of the AnVILWorkflow package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AnVILWorkflow.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: AnVILWorkflow
Version: 1.5.0
Command: chmod a+r AnVILWorkflow -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data AnVILWorkflow
StartedAt: 2024-07-17 17:06:59 -0400 (Wed, 17 Jul 2024)
EndedAt: 2024-07-17 17:07:03 -0400 (Wed, 17 Jul 2024)
EllapsedTime: 4.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r AnVILWorkflow -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data AnVILWorkflow
###
##############################################################################
##############################################################################


* checking for file 'AnVILWorkflow/DESCRIPTION' ... OK
* preparing 'AnVILWorkflow':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'AnVILWorkflow' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error: object 'avworkspaces' is not exported by 'namespace:AnVIL'
Execution halted
ERROR: lazy loading failed for package 'AnVILWorkflow'
* removing 'F:/biocbuild/bbs-3.20-bioc/tmpdir/RtmpqIIQhG/Rinst587468d76aa9/AnVILWorkflow'
      -----------------------------------
ERROR: package installation failed