yeastGSData 0.7.0
R. Gentleman
| Snapshot Date: 2015-08-22 06:15:25 -0700 (Sat, 22 Aug 2015) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/yeastGSData | | Last Changed Rev: 3281 / Revision: 3391 | | Last Changed Date: 2015-04-16 13:20:43 -0700 (Thu, 16 Apr 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | WARNINGS | |  |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ WARNINGS ] | OK | |
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | WARNINGS | OK | |
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### Running command:
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### rm -rf yeastGSData.buildbin-libdir yeastGSData.Rcheck && mkdir yeastGSData.buildbin-libdir yeastGSData.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=yeastGSData.buildbin-libdir yeastGSData_0.7.0.tar.gz >yeastGSData.Rcheck\00install.out 2>&1 && cp yeastGSData.Rcheck\00install.out yeastGSData-install.out && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=yeastGSData.buildbin-libdir --install="check:yeastGSData-install.out" --force-multiarch --no-vignettes --timings yeastGSData_0.7.0.tar.gz
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* using log directory 'D:/biocbld/bbs-3.2-data-experiment/meat/yeastGSData.Rcheck'
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'yeastGSData/DESCRIPTION' ... OK
* this is package 'yeastGSData' version '0.7.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'yeastGSData' can be installed ... OK
* checking installed package size ... NOTE
installed size is 65.2Mb
sub-directories of 1Mb or more:
extdata 64.2Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking Rd files ... NOTE
prepare_Rd: BayesFactorNGS.Rd:24-25: Dropping empty section \source
prepare_Rd: BayesFactorNGS.Rd:26-27: Dropping empty section \references
prepare_Rd: BayesFactorPGS.Rd:24-25: Dropping empty section \source
prepare_Rd: BayesFactorPGS.Rd:26-27: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
BayesFactorNGS.rda 46Kb 18Kb xz
BayesFactorPGS.rda 70Kb 32Kb xz
MIPSGS.rda 15Kb 9Kb xz
Mpact.rda 199Kb 136Kb bzip2
NEGGS.rda 600Kb 40Kb xz
* checking examples ...
** running examples for arch 'i386' ... [7s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
NEGGS 6.13 0.11 6.24
** running examples for arch 'x64' ... [6s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
NEGGS 5.4 0.15 5.55
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 3 NOTEs
See
'D:/biocbld/bbs-3.2-data-experiment/meat/yeastGSData.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'yeastGSData' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
install for x64
* installing *source* package 'yeastGSData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'yeastGSData' as yeastGSData_0.7.0.zip
* DONE (yeastGSData)