gcspikelite 1.7.0 Mark Robinson
Snapshot Date: 2015-08-22 06:15:25 -0700 (Sat, 22 Aug 2015) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/gcspikelite | Last Changed Rev: 3281 / Revision: 3391 | Last Changed Date: 2015-04-16 13:20:43 -0700 (Thu, 16 Apr 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | WARNINGS | | |
moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | WARNINGS | OK | |
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | [ WARNINGS ] | OK | |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings gcspikelite_1.7.0.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.2-data-experiment/meat/gcspikelite.Rcheck’
* using R version 3.2.2 Patched (2015-08-14 r69078)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘gcspikelite/DESCRIPTION’ ... OK
* this is package ‘gcspikelite’ version ‘1.7.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘gcspikelite’ can be installed ... [1s/3s] OK
* checking installed package size ... NOTE
installed size is 67.7Mb
sub-directories of 1Mb or more:
data 67.6Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... WARNING
Files not of a type allowed in a ‘data’ directory:
‘0709_468.CDF’ ‘0709_468.ELU’ ‘0709_470.CDF’ ‘0709_470.ELU’
‘0709_471.CDF’ ‘0709_471.ELU’ ‘0709_474.CDF’ ‘0709_474.ELU’
‘0709_475.CDF’ ‘0709_475.ELU’ ‘0709_479.CDF’ ‘0709_479.ELU’
‘0709_485.CDF’ ‘0709_485.ELU’ ‘0709_493.CDF’ ‘0709_493.ELU’
‘0709_496.CDF’ ‘0709_496.ELU’ ‘chromaTOFex.tof’
Please use e.g. ‘inst/extdata’ for non-R data files
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 2 NOTEs
See
‘/Users/biocbuild/bbs-3.2-data-experiment/meat/gcspikelite.Rcheck/00check.log’
for details.