BioC experimental data: CHECK report for GSVAdata on moscato1

Package: GSVAdata

Version: 1.5.0

Command: rm -rf GSVAdata.buildbin-libdir GSVAdata.Rcheck && mkdir GSVAdata.buildbin-libdir GSVAdata.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=GSVAdata.buildbin-libdir GSVAdata_1.5.0.tar.gz >GSVAdata.Rcheck\00install.out 2>&1 && cp GSVAdata.Rcheck\00install.out GSVAdata-install.out && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=GSVAdata.buildbin-libdir --install="check:GSVAdata-install.out" --force-multiarch --no-vignettes --timings GSVAdata_1.5.0.tar.gz

StartedAt: 2015-08-22 11:58:40 -0700 (Sat, 22 Aug 2015)

EndedAt: 2015-08-22 12:01:22 -0700 (Sat, 22 Aug 2015)

EllapsedTime: 162.7 seconds

RetCode: 0

Status:  OK

CheckDir: GSVAdata.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf GSVAdata.buildbin-libdir GSVAdata.Rcheck && mkdir GSVAdata.buildbin-libdir GSVAdata.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=GSVAdata.buildbin-libdir GSVAdata_1.5.0.tar.gz >GSVAdata.Rcheck\00install.out 2>&1 && cp GSVAdata.Rcheck\00install.out GSVAdata-install.out  && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=GSVAdata.buildbin-libdir --install="check:GSVAdata-install.out" --force-multiarch --no-vignettes --timings GSVAdata_1.5.0.tar.gz
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* using log directory 'D:/biocbld/bbs-3.2-data-experiment/meat/GSVAdata.Rcheck'
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'GSVAdata/DESCRIPTION' ... OK
* this is package 'GSVAdata' version '1.5.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'GSVAdata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 12.8Mb
  sub-directories of 1Mb or more:
    data  12.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [10s] OK
** running examples for arch 'x64' ... [10s] OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  'D:/biocbld/bbs-3.2-data-experiment/meat/GSVAdata.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'GSVAdata' ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'GSVAdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GSVAdata' as GSVAdata_1.5.0.zip
* DONE (GSVAdata)

name	user	system	elapsed
annotEntrez220212	0.07	0.00	0.07
brainTxDbSets	0.00	0.00	0.02
c2BroadSets	3.26	0.12	3.38
commonPickrellHuang	0.61	0.00	0.61
gbm_VerhaakEtAl	0.98	0.04	1.01
genderGenesEntrez	0	0	0
leukemia	0.44	0.01	0.46

name	user	system	elapsed
annotEntrez220212	0.05	0.00	0.05
brainTxDbSets	0.01	0.00	0.01
c2BroadSets	2.67	0.09	2.76
commonPickrellHuang	0.94	0.06	1.00
gbm_VerhaakEtAl	0.5	0.0	0.5
genderGenesEntrez	0	0	0
leukemia	0.35	0.04	0.37