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BioC 3.2: INSTALL report for wateRmelon on perceval

This page was generated on 2015-11-10 14:47:51 -0800 (Tue, 10 Nov 2015).

Package 1091/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
wateRmelon 1.10.0
Leo
Snapshot Date: 2015-11-09 16:24:09 -0800 (Mon, 09 Nov 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/wateRmelon
Last Changed Rev: 109589 / Revision: 110496
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: wateRmelon
Version: 1.10.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL wateRmelon
StartedAt: 2015-11-09 17:24:57 -0800 (Mon, 09 Nov 2015)
EndedAt: 2015-11-09 17:25:31 -0800 (Mon, 09 Nov 2015)
EllapsedTime: 34.0 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL wateRmelon
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library’
* installing *source* package ‘wateRmelon’ ...
** R
** data
** inst
** preparing package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : Error in 'rgl_init'
Creating a generic function from function ‘as.methylumi’ in package ‘wateRmelon’
in method for ‘betaqn’ with signature ‘bn="exprmethy450"’: no definition for class “exprmethy450”
in method for ‘fuks’ with signature ‘data="exprmethy450"’: no definition for class “exprmethy450”
in method for ‘genki’ with signature ‘bn="exprmethy450"’: no definition for class “exprmethy450”
in method for ‘dmrse’ with signature ‘betas="exprmethy450"’: no definition for class “exprmethy450”
in method for ‘dmrse_row’ with signature ‘betas="exprmethy450"’: no definition for class “exprmethy450”
in method for ‘dmrse_col’ with signature ‘betas="exprmethy450"’: no definition for class “exprmethy450”
in method for ‘seabi’ with signature ‘bn="exprmethy450"’: no definition for class “exprmethy450”
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘wateRmelon.Rnw’ 
** testing if installed package can be loaded
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : Error in 'rgl_init'
* DONE (wateRmelon)