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BioC 3.2: INSTALL report for GeneSelectMMD on linux1.bioconductor.org

This page was generated on 2015-10-27 17:24:24 -0400 (Tue, 27 Oct 2015).

Package 409/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneSelectMMD 2.14.0
Weiliang Qiu
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/GeneSelectMMD
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GeneSelectMMD
Version: 2.14.0
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL GeneSelectMMD
StartedAt: 2015-10-26 20:02:31 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 20:02:36 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 5.0 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL GeneSelectMMD
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.2-bioc/R/library’
* installing *source* package ‘GeneSelectMMD’ ...
** libs
gfortran   -fpic  -g -O2  -Wall -c Qfunc.f -o Qfunc.o
gfortran   -fpic  -g -O2  -Wall -c blas.f -o blas.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c isnan.c -o isnan.o
gfortran   -fpic  -g -O2  -Wall -c lbfgsb.f -o lbfgsb.o
lbfgsb.f: In function ‘cauchy’:
lbfgsb.f:1453:0: warning: ‘tu’ may be used uninitialized in this function [-Wmaybe-uninitialized]
             xupper = nbd(i) .ge. 2 .and. tu .le. zero
 ^
lbfgsb.f:1482:0: warning: ‘tl’ may be used uninitialized in this function [-Wmaybe-uninitialized]
                t(nbreak) = tl/(-neggi)
 ^
gfortran   -fpic  -g -O2  -Wall -c lbfgsbDriver.f -o lbfgsbDriver.o
gfortran   -fpic  -g -O2  -Wall -c linpack.f -o linpack.o
gfortran   -fpic  -g -O2  -Wall -c llkhFun.f -o llkhFun.o
gfortran   -fpic  -g -O2  -Wall -c myTtest.f -o myTtest.o
gfortran   -fpic  -g -O2  -Wall -c paraEstLoop.f -o paraEstLoop.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c pt.c -o pt.o
gfortran   -fpic  -g -O2  -Wall -c timer.f -o timer.o
gfortran   -fpic  -g -O2  -Wall -c wiFun.f -o wiFun.o
gcc -std=gnu99 -shared -L/home/biocbuild/bbs-3.2-bioc/R/lib -L/usr/local/lib -o GeneSelectMMD.so Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.2-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.2-bioc/R/library/GeneSelectMMD/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GeneSelectMMD)