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BioC 3.2: BUILD report for rTRM on zin1

This page was generated on 2015-08-24 10:49:24 -0700 (Mon, 24 Aug 2015).

Package 901/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rTRM 1.7.1
Diego Diez
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rTRM
Last Changed Rev: 105364 / Revision: 107696
Last Changed Date: 2015-06-23 03:21:32 -0700 (Tue, 23 Jun 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK [ OK ] OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: rTRM
Version: 1.7.1
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rTRM
StartedAt: 2015-08-23 19:39:53 -0700 (Sun, 23 Aug 2015)
EndedAt: 2015-08-23 19:40:27 -0700 (Sun, 23 Aug 2015)
EllapsedTime: 34.1 seconds
RetCode: 0
Status:  OK 
PackageFile: rTRM_1.7.1.tar.gz
PackageFileSize: 2.974 MiB

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rTRM
###
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##############################################################################


* checking for file ‘rTRM/DESCRIPTION’ ... OK
* preparing ‘rTRM’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX Loading required package: igraph

Attaching package: ‘igraph’

The following objects are masked from ‘package:stats’:

    decompose, spectrum

The following object is masked from ‘package:base’:

    union

...
Creating pdf output from LaTeX ...

This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/Debian)
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entering extended mode
LaTeX2e <2011/06/27>
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(./Rd2.tex (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
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vertex.pch = 21, vertex.cex, vertex.col, vertex.bg, vertex.lwd, edge.col, edge.
lwd, edge.lty, label = TRUE, label.col, label.cex, label.pos = NULL, label.offs
et = 1.5, adjust.label.col = FALSE, normalize.layout = TRUE)[] 
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rtex.col, vertex.cex, vertex.lwd, edge.col, edge.lwd, edge.lty, label = TRUE, l
abel.cex, label.col, label.pos = NULL, label.offset = 1.5, adjust.label.col = F
ALSE, normalize.layout = TRUE)[] 
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s/type1/urw/times/utmri8a.pfb>
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inconsolata/i4-t1-0.enc}</usr/share/texlive/texmf-dist/fonts/type1/public/incon
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s/type1/urw/times/utmri8a.pfb>
Output written on Rd2.pdf (23 pages, 170093 bytes).
Transcript written on Rd2.log.
Saving output to ‘/tmp/RtmpqaywWk/Rbuild489024ebc567/rTRM/build/rTRM.pdf’ ...
Done
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
* building ‘rTRM_1.7.1.tar.gz’