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BioC 3.2: INSTALL report for multtest on linux1.bioconductor.org

This page was generated on 2015-10-27 17:23:16 -0400 (Tue, 27 Oct 2015).

Package 686/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
multtest 2.26.0
Katherine S. Pollard
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/multtest
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: multtest
Version: 2.26.0
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL multtest
StartedAt: 2015-10-26 20:02:23 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 20:02:27 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 4.5 seconds
RetCode: 0
Status:  OK 

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL multtest
###
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* installing to library ‘/home/biocbuild/bbs-3.2-bioc/R/library’
* installing *source* package ‘multtest’ ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c Rpack.c -o Rpack.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c VScount.c -o VScount.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c block_sampling_fixed.c -o block_sampling_fixed.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c bootloop.c -o bootloop.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c mt.c -o mt.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c pairt_sampling.c -o pairt_sampling.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c pairt_sampling_fixed.c -o pairt_sampling_fixed.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c random.c -o random.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c sampling.c -o sampling.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c sampling_fixed.c -o sampling_fixed.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c stat_func.c -o stat_func.o
stat_func.c: In function ‘read_infile’:
stat_func.c:703:9: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fh, "%s", pdata->name);
         ^
stat_func.c:705:11: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fh, "%d", pdata->L+j);
           ^
stat_func.c:710:11: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fh, "%s", pdata->id[i]);
           ^
stat_func.c:714:13: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fh, "%lg",&ftemp);
             ^
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include   -DUSEDOUBLE -fpic  -g -O2  -Wall -c stat_order.c -o stat_order.o
gcc -std=gnu99 -shared -L/home/biocbuild/bbs-3.2-bioc/R/lib -L/usr/local/lib -o multtest.so Rpack.o VScount.o block_sampling_fixed.o bootloop.o mt.o pairt_sampling.o pairt_sampling_fixed.o random.o sampling.o sampling_fixed.o stat_func.o stat_order.o -lm -L/home/biocbuild/bbs-3.2-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.2-bioc/R/library/multtest/libs
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for ‘update’ from package ‘stats’ in package ‘multtest’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (multtest)