diggit 1.1.1
Mariano J Alvarez
| Snapshot Date: 2015-08-19 16:24:33 -0700 (Wed, 19 Aug 2015) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/diggit | | Last Changed Rev: 103317 / Revision: 107602 | | Last Changed Date: 2015-04-30 10:26:20 -0700 (Thu, 30 Apr 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ OK ] | OK | |
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | OK | OK | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### rm -rf diggit.buildbin-libdir diggit.Rcheck && mkdir diggit.buildbin-libdir diggit.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=diggit.buildbin-libdir diggit_1.1.1.tar.gz >diggit.Rcheck\00install.out 2>&1 && cp diggit.Rcheck\00install.out diggit-install.out && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=diggit.buildbin-libdir --install="check:diggit-install.out" --force-multiarch --no-vignettes --timings diggit_1.1.1.tar.gz
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* using log directory 'D:/biocbld/bbs-3.2-bioc/meat/diggit.Rcheck'
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'diggit/DESCRIPTION' ... OK
* this is package 'diggit' version '1.1.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'diggit' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [259s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
marina-methods 156.81 11.23 168.15
conditional-methods 20.98 0.33 21.31
diggit-plot 20.91 0.19 21.09
aqtl-methods 20.09 0.35 27.99
diggit-methods 10.00 0.18 10.22
** running examples for arch 'x64' ... [275s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
marina-methods 174.49 11.54 186.03
conditional-methods 24.13 0.19 24.32
diggit-plot 23.04 0.13 23.17
aqtl-methods 20.36 0.18 20.61
diggit-methods 9.25 0.16 9.41
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
'D:/biocbld/bbs-3.2-bioc/meat/diggit.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'diggit' ...
** R
** inst
** preparing package for lazy loading
Creating a generic function for 'print' from package 'base' in package 'diggit'
Creating a generic function for 'summary' from package 'base' in package 'diggit'
Creating a generic function for 'head' from package 'utils' in package 'diggit'
Creating a generic function for 'plot' from package 'graphics' in package 'diggit'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'diggit' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'diggit' as diggit_1.1.1.zip
* DONE (diggit)