IONiseR 0.99.9 Mike Smith
Snapshot Date: 2015-08-19 16:24:33 -0700 (Wed, 19 Aug 2015) | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/IONiseR | Last Changed Rev: 107581 / Revision: 107602 | Last Changed Date: 2015-08-19 09:37:59 -0700 (Wed, 19 Aug 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | ERROR | skipped | | |
moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | [ ERROR ] | skipped | skipped | |
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | ERROR | skipped | skipped | |
oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | ERROR | skipped | skipped | |
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### Running command:
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### chmod a+r IONiseR -R && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data IONiseR
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* checking for file 'IONiseR/DESCRIPTION' ... OK
* preparing 'IONiseR':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
Warning: running command '"D:/biocbld/bbs-3.2-bioc/R/bin/x64/Rcmd.exe" INSTALL -l "D:\biocbld\bbs-3.2-bioc\tmpdir\Rtmpmus6RA\Rinst494c698b43e7" --no-multiarch "D:/biocbld/bbs-3.2-bioc/tmpdir/Rtmpmus6RA/Rbuild494c3e707dc5/IONiseR"' had status 1
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* installing *source* package 'IONiseR' ...
** R
** inst
** preparing package for lazy loading
in method for 'readInfo' with signature 'x="Fast5Summary"': no definition for class "Fast5Summary"
in method for 'rawData' with signature 'x="Fast5Summary"': no definition for class "Fast5Summary"
in method for 'baseCalled' with signature 'x="Fast5Summary"': no definition for class "Fast5Summary"
in method for 'fastq' with signature 'x="Fast5Summary"': no definition for class "Fast5Summary"
in method for '[' with signature '"Fast5Summary","ANY"': no definition for class "Fast5Summary"
in method for 'fastqTemplate' with signature 'x="Fast5Summary"': no definition for class "Fast5Summary"
in method for 'fastqComplement' with signature 'x="Fast5Summary"': no definition for class "Fast5Summary"
in method for 'fastq2D' with signature 'x="Fast5Summary"': no definition for class "Fast5Summary"
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Error in namespaceExport(ns, exports) : undefined exports: plotYield
Error: loading failed
Execution halted
ERROR: loading failed
* removing 'D:/biocbld/bbs-3.2-bioc/tmpdir/Rtmpmus6RA/Rinst494c698b43e7/IONiseR'
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ERROR: package installation failed