Back to Multiple platform build/check report for BioC 3.16 |
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This page was generated on 2022-07-07 11:11:41 -0400 (Thu, 07 Jul 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" | 4343 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" | 4148 |
lconway | macOS 12.2.1 Monterey | x86_64 | 4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" | 4160 |
kjohnson | macOS 12.4 Monterey | arm64 | 4.2.0 Patched (2022-06-09 r82473) -- "Vigorous Calisthenics" | 3115 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the paxtoolsr package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/paxtoolsr.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1411/2124 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
paxtoolsr 1.31.0 (landing page) Augustin Luna
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
lconway | macOS 12.2.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
kjohnson | macOS 12.4 Monterey / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
Package: paxtoolsr |
Version: 1.31.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data paxtoolsr |
StartedAt: 2022-07-07 01:58:45 -0400 (Thu, 07 Jul 2022) |
EndedAt: 2022-07-07 01:58:47 -0400 (Thu, 07 Jul 2022) |
EllapsedTime: 2.1 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data paxtoolsr ### ############################################################################## ############################################################################## * checking for file ‘paxtoolsr/DESCRIPTION’ ... OK * preparing ‘paxtoolsr’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes ----------------------------------- * installing *source* package ‘paxtoolsr’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading The operation couldn’t be completed. Unable to locate a Java Runtime. Please visit http://www.java.com for information on installing Java. Error: package or namespace load failed for ‘rJava’: .onLoad failed in loadNamespace() for 'rJava', details: call: fun(libname, pkgname) error: JVM could not be found In addition: Warning messages: 1: In fun(libname, pkgname) : JAVA_HOME is set incorrectly! Ingoring. 2: In system("/usr/libexec/java_home", intern = TRUE) : running command '/usr/libexec/java_home' had status 1 3: In fun(libname, pkgname) : Cannot find JVM library 'NA/lib/server/libjvm.dylib' Install Java and/or check JAVA_HOME (if in doubt, do NOT set it, it will be detected) Execution halted ERROR: lazy loading failed for package ‘paxtoolsr’ * removing ‘/private/tmp/RtmpUzZ0nU/Rinst15bd489c1320/paxtoolsr’ ----------------------------------- ERROR: package installation failed