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This page was generated on 2022-03-18 11:08:57 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for uSORT on riesling1


To the developers/maintainers of the uSORT package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/uSORT.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2040/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
uSORT 1.21.0  (landing page)
Hao Chen
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/uSORT
git_branch: master
git_last_commit: 82fa06f
git_last_commit_date: 2021-10-26 12:30:07 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: uSORT
Version: 1.21.0
Command: rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=uSORT.buildbin-libdir uSORT_1.21.0.tar.gz
StartedAt: 2022-03-17 21:46:46 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:48:09 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 82.5 seconds
RetCode: 0
Status:   OK  
PackageFile: uSORT_1.21.0.zip
PackageFileSize: 2.018 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=uSORT.buildbin-libdir uSORT_1.21.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'uSORT' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'BiocGenerics' for request: 'clusterEvalQ' when loading 'uSORT'
No methods found in package 'BiocGenerics' for request: 'parCapply' when loading 'uSORT'
No methods found in package 'BiocGenerics' for request: 'parRapply' when loading 'uSORT'
Note: break used in wrong context: no loop is visible 
** help
*** installing help indices
  converting help for package 'uSORT'
    finding HTML links ... done
    EXP_to_CellDataSet                      html  
    Rwanderlust                             html  
    SPIN                                    html  
    STS_sorting                             html  
    STS_sorting_wrapper                     html  
    STS_sortingcost                         html  
    autoSPIN                                html  
    clusterGenes1                           html  
    compareModels1                          html  
    diff_test_helper1                       html  
    differentialGeneTest1                   html  
    distance.function                       html  
    driving_force_gene_selection            html  
    elbow_detection                         html  
    fluidigmSC_analyzeGeneDetection         html  
    fluidigmSC_identifyExpOutliers          html  
    fluidigmSC_isElementIgnoreCase          html  
    fluidigmSC_readLinearExp                html  
    fluidigmSC_removeGenesByLinearExpForAllType
                                            html  
    fluidigmSC_removeGenesByLinearExpForAllType_log2
                                            html  
    monocle_wrapper                         html  
    neighborhood_sorting                    html  
    neighborhood_sorting_wrapper            html  
    neighborhood_sortingcost                html  
    pca_gene_selection                      html  
    sWanderlust                             html  
    scattering_quantification_per_gene      html  
    sorting_method_parameter_GUI            html  
    summed_local_variance                   html  
    summed_local_variance_cyclical          html  
    summed_local_variance_linear            html  
    trajectory_landmarks                    html  
    uSORT                                   html  
    uSORT_GUI                               html  
    uSORT_parameters_GUI                    html  
    uSORT_preProcess                        html  
    uSORT_sorting_wrapper                   html  
    uSORT_write_results                     html  
    variability_per_gene                    html  
    wanderlust_wrapper                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'BiocGenerics' for request: 'clusterEvalQ' when loading 'uSORT'
No methods found in package 'BiocGenerics' for request: 'parCapply' when loading 'uSORT'
No methods found in package 'BiocGenerics' for request: 'parRapply' when loading 'uSORT'
** testing if installed package can be loaded from final location
No methods found in package 'BiocGenerics' for request: 'clusterEvalQ' when loading 'uSORT'
No methods found in package 'BiocGenerics' for request: 'parCapply' when loading 'uSORT'
No methods found in package 'BiocGenerics' for request: 'parRapply' when loading 'uSORT'
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'uSORT' as uSORT_1.21.0.zip
* DONE (uSORT)