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This page was generated on 2022-03-18 11:08:27 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for recount on riesling1


To the developers/maintainers of the recount package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/recount.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1573/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
recount 1.21.1  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/recount
git_branch: master
git_last_commit: 10f29f9
git_last_commit_date: 2021-11-22 19:53:08 -0400 (Mon, 22 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: recount
Version: 1.21.1
Command: rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=recount.buildbin-libdir recount_1.21.1.tar.gz
StartedAt: 2022-03-17 21:32:47 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:34:09 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 81.6 seconds
RetCode: 0
Status:   OK  
PackageFile: recount_1.21.1.zip
PackageFileSize: 7.236 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=recount.buildbin-libdir recount_1.21.1.tar.gz
###
##############################################################################
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* installing *source* package 'recount' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'recount'
    finding HTML links ... done
    abstract_search                         html  
    add_metadata                            html  
    add_predictions                         html  
    all_metadata                            html  
    browse_study                            html  
    coverage_matrix                         html  
    download_retry                          html  
    download_study                          html  
    expressed_regions                       html  
    find_geo                                html  
    geo_characteristics                     html  
    geo_info                                html  
    getRPKM                                 html  
    getTPM                                  html  
    read_counts                             html  
    recount-package                         html  
    recount_abstract                        html  
    recount_exons                           html  
    recount_genes                           html  
    recount_url                             html  
    reproduce_ranges                        html  
    rse_gene_SRP009615                      html  
    scale_counts                            html  
    snaptron_query                          html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'recount' as recount_1.21.1.zip
* DONE (recount)