Robert Castelo
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/qpgraph |
| git_branch: master |
| git_last_commit: 959aa0c |
| git_last_commit_date: 2022-02-08 13:36:59 -0400 (Tue, 08 Feb 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:23 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the qpgraph package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/qpgraph.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1506/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| qpgraph 2.29.1 (landing page) Robert Castelo
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: qpgraph |
| Version: 2.29.1 |
| Command: rm -rf qpgraph.buildbin-libdir && mkdir qpgraph.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=qpgraph.buildbin-libdir qpgraph_2.29.1.tar.gz |
| StartedAt: 2022-03-17 21:30:40 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:31:56 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 76.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: qpgraph_2.29.1.zip |
| PackageFileSize: 4.192 MiB |
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### Running command:
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### rm -rf qpgraph.buildbin-libdir && mkdir qpgraph.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=qpgraph.buildbin-libdir qpgraph_2.29.1.tar.gz
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* installing *source* package 'qpgraph' ...
** using staged installation
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
"C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c cliquer.c -o cliquer.o
"C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c graph.c -o graph.o
"C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c qpgraph.c -o qpgraph.o
"C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c reorder.c -o reorder.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o qpgraph.dll tmp.def cliquer.o graph.o qpgraph.o reorder.o -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lRlapack -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lRblas -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/meat/qpgraph.buildbin-libdir/00LOCK-qpgraph/00new/qpgraph/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'det' from package 'Matrix' in package 'qpgraph'
** help
*** installing help indices
converting help for package 'qpgraph'
finding HTML links ... done
EcoliOxygen html
HMgmm-class html
SsdMatrix-class html
UGgmm-class html
eQTLcross-class html
eQTLnetwork-class html
eQTLnetworkEstimate html
eQTLnetworkEstimationParam-class html
filterCollinearities html
graphParam-class html
qpAllCItests html
qpAnyGraph html
qpAvgNrr html
qpBoundary html
qpCItest html
qpClique html
qpCliqueNumber html
qpCov html
qpEdgeNrr html
qpFunctionalCoherence html
qpG2Sigma html
qpGenNrr html
qpGetCliques html
qpGraph-class html
qpGraphDensity html
qpHTF html
qpHist html
qpIPF html
qpImportNrr html
qpK2ParCor html
qpNrr html
qpPAC html
qpPCC html
qpPRscoreThreshold html
qpPathWeight html
qpPlotMap html
qpPlotNetwork html
qpPrecisionRecall html
qpRndGraph html
qpRndWishart html
qpTopPairs html
qpUnifRndAssociation html
qpUpdateCliquesRemoving html
qpgraph-package html
REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/meat/qpgraph.buildbin-libdir/00LOCK-qpgraph/00new/qpgraph/help/qpgraph.html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'qpgraph' as qpgraph_2.29.1.zip
* DONE (qpgraph)