Surajit Bhattacharya
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/nanotatoR |
| git_branch: master |
| git_last_commit: e57fa17 |
| git_last_commit_date: 2021-10-26 12:51:40 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:09 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the nanotatoR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/nanotatoR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1274/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| nanotatoR 1.11.0 (landing page) Surajit Bhattacharya
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: nanotatoR |
| Version: 1.11.0 |
| Command: rm -rf nanotatoR.buildbin-libdir && mkdir nanotatoR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=nanotatoR.buildbin-libdir nanotatoR_1.11.0.tar.gz |
| StartedAt: 2022-03-17 21:24:30 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:26:01 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 90.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: nanotatoR_1.11.0.zip |
| PackageFileSize: 764.1 KiB |
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### Running command:
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### rm -rf nanotatoR.buildbin-libdir && mkdir nanotatoR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=nanotatoR.buildbin-libdir nanotatoR_1.11.0.tar.gz
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* installing *source* package 'nanotatoR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'nanotatoR'
finding HTML links ... done
BNDBfrequency html
DGVfrequency html
Decipherfrequency html
FamilyInfoPrep html
OverlapRNAseq html
OverlapRNAseq_solo html
RNAseqcombine html
RNAseqcombine_solo html
SVexpression_duo_trio html
SVexpression_solo html
buildrunBNBedFiles html
clinvar_gene html
extract_clinvar_mod html
gene_extraction html
gene_list_generation html
gtr_gene html
internalFrequencyTrio_Duo html
internalFrequency_solo html
makeInternalBNDatabase html
mergingSMAP_SE html
mergingSMAP_SVMerge html
merging_SE_SVMerge html
nanotatoR html
nanotatoR_Duo_SVmerge html
nanotatoR_SVmerge_Trio html
nanotatoR_main_Duo_SE html
nanotatoR_main_Solo_SE html
nanotatoR_main_Solo_SVmerge html
nanotatoR_main_Trio_SE html
nonOverlapGenes html
nonOverlapRNAseq html
nonOverlapRNAseq_solo html
nonOverlappingDNGenes html
nonOverlappingUPGenes html
omim_gene html
overlapGenes html
overlapnearestgeneSearch html
overlappingGenes html
phenoextractHPO_mod html
readBNBedFiles html
readSMap html
readSMap_DLE html
reading_GTR html
reading_mim2gene html
run_bionano_filter_SE_Trio html
run_bionano_filter_SE_duo html
run_bionano_filter_SE_solo html
run_bionano_filter_SVMerge_Trio html
run_bionano_filter_SVMerge_duo html
run_bionano_filter_SVMerge_solo html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'nanotatoR' as nanotatoR_1.11.0.zip
* DONE (nanotatoR)