Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-03-18 11:08:03 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for miRSM on riesling1


To the developers/maintainers of the miRSM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/miRSM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1175/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
miRSM 1.13.2  (landing page)
Junpeng Zhang
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/miRSM
git_branch: master
git_last_commit: 3a7d80d
git_last_commit_date: 2021-12-16 16:49:32 -0400 (Thu, 16 Dec 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: miRSM
Version: 1.13.2
Command: rm -rf miRSM.buildbin-libdir && mkdir miRSM.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=miRSM.buildbin-libdir miRSM_1.13.2.tar.gz
StartedAt: 2022-03-17 21:21:49 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:23:14 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 84.2 seconds
RetCode: 0
Status:   OK  
PackageFile: miRSM_1.13.2.zip
PackageFileSize: 1013 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf miRSM.buildbin-libdir && mkdir miRSM.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=miRSM.buildbin-libdir miRSM_1.13.2.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'miRSM' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c complex.c -o complex.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o miRSM.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/meat/miRSM.buildbin-libdir/00LOCK-miRSM/00new/miRSM/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'miRSM'
    finding HTML links ... done
    BRCA_genes                              html  
    ceRExp                                  html  
    cor_binary                              html  
    mRExp                                   html  
    miRExp                                  html  
    miRSM                                   html  
    miRTarget                               html  
    module_CEA                              html  
    module_Coexpress                        html  
    module_FA                               html  
    module_GFA                              html  
    module_NMF                              html  
    module_ProNet                           html  
    module_Validate                         html  
    module_WGCNA                            html  
    module_biclust                          html  
    module_clust                            html  
    module_igraph                           html  
    module_miRdistribute                    html  
    module_miRsponge                        html  
    module_miRtarget                        html  
    share_miRs                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'miRSM' as miRSM_1.13.2.zip
* DONE (miRSM)