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This page was generated on 2022-03-18 11:07:48 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for immunotation on riesling1


To the developers/maintainers of the immunotation package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/immunotation.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 930/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
immunotation 1.3.0  (landing page)
Katharina Imkeller
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/immunotation
git_branch: master
git_last_commit: 5d11f6b
git_last_commit_date: 2021-10-26 13:09:18 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: immunotation
Version: 1.3.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL immunotation
StartedAt: 2022-03-17 15:56:29 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:59:10 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 161.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL immunotation
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'immunotation' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'immunotation'
    finding HTML links ... done
    assemble_protein_complex                html  
    build_allele_group                      html  
    check_geographics                       html  
    check_hla_locus                         html  
    check_hla_selection                     html  
    check_population                        html  
    check_sample_size                       html  
    check_standard                          html  
    create_encode_handle                    html  
    decode_MAC                              html  
    encode_MAC                              html  
    extract_population_id                   html  
    extract_population_info                 html  
    extract_population_name                 html  
    extract_sample_info                     html  
    fetch_encoded_MAC                       html  
    getURL                                  html  
    get_G_group                             html  
    get_P_group                             html  
    get_external_file                       html  
    get_mhcpan_input                        html  
    get_nb_pages                            html  
    get_serotypes                           html  
    get_valid_geographics                   html  
    get_valid_organisms                     html  
    human_protein_complex_table             html  
    load_mro                                html  
    mro.obo                                 html  
    parse_allele_freq_html                  html  
    parse_haplotype_freq_html               html  
    plot_allele_frequency                   html  
    query_allele_frequencies                html  
    query_haplotype_frequencies             html  
    query_population_detail                 html  
    read_complete_freq_table                html  
    read_population_detail                  html  
    retrieve_chain_lookup_table             html  
    verify_parameters                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (immunotation)
Making 'packages.html' ... done